Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01] 955 sequences; 2,870,184,193 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq232 347 2e-93 seq271 239 8e-61 seq1 185 1e-44 seq206 167 4e-39 seq80 105 1e-20 seq97 104 4e-20 seq154 100 5e-19 seq166 89.7 9e-16 seq117 82.4 1e-13 seq129 77.0 6e-12 >seq232 Length=115493446 Score = 347 bits (384), Expect = 2e-93 Identities = 254/294 (86%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 46329524 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 46329583 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 46329584 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 46329643 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 46329644 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 46329703 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 46329704 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 46329763 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 46329764 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 46329817 Score = 340 bits (376), Expect = 3e-91 Identities = 254/295 (86%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAAC-CTGTCT 58 |||| ||| | |||||||| | | || |||||||||||||||||||||| |||||| Sbjct 46525646 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACTCTGTCT 46525587 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46525586 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGT 46525527 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 46525526 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCT 46525467 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 46525466 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGC 46525407 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 46525406 TTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 46525352 Score = 325 bits (360), Expect = 7e-87 Identities = 252/296 (85%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 46655099 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 46655040 Query 60 ATGACGGTCTAAACCC-AGCTCACGTT-CCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 | |||||||||||||| | || ||||| |||||||||||||||||||||||||||||| Sbjct 46655039 ACGACGGTCTAAACCCCATCTGACGTTACCCTATTAGTGGGTGAACAATCCAACGCTTGG 46654980 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 46654979 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 46654920 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | Sbjct 46654919 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTG 46654860 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 46654859 CTTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 46654804 >seq271 Length=90843779 Score = 239 bits (264), Expect = 8e-61 Identities = 174/204 (85%), Gaps = 11/204 (5%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||| ||| |||||| || ||||||| Sbjct 57193989 TCATCAGTAGGGTAAAACTAACCTGTCT-----------AAATCCAGCTAACCTTCCCTA 57194037 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||| |||| |||||||||||| |||||||| ||||| || Sbjct 57194038 TTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGGAGAGCAGA 57194097 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||||||||||||| || | ||||||||| ||||||||||||||||||||||||| Sbjct 57194098 CATCAAAGGATCAAAAAGCGACATTGCTATGAACACTTGGCTGCCACAAGCCAGTTATCC 57194157 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||| ||| || Sbjct 57194158 CTGTGGTAACTTTTCTGACACTTC 57194181 >seq1 Length=282763074 Score = 185 bits (204), Expect = 1e-44 Identities = 145/174 (83%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 |||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| Sbjct 217728016 TCTAAACCCAGCTCACATTCCCTACTTGTGGGTGAACAATCCAACACTTGGTGAATTCTG 217728075 Query 127 CTTCGGTATGATAGGAAGAG------CCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 | || ||||||||||||| ||||||||||||||||||||| ||||| || | Sbjct 217728076 CCTCACAATGATAGGAAGAGTCGACATCGACATCGAAGGATCAAAAAGTGACGTCCCTGT 217728135 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||| ||| ||| ||||| |||||||||||||||||||||||||||| ||| || Sbjct 217728136 GAATGCTGGGCCACCACAGGCCAGTTATCCCTGTGGTAACTTTTCTGACACTTC 217728189 >seq206 Length=52716770 Score = 167 bits (184), Expect = 4e-39 Identities = 157/196 (80%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18224138 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18224195 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| |||||||||||||| || ||||||||| || | | ||| ||| |||| Sbjct 18224196 ACTGGGTCAACAATCCAACGCTAGGTGAGTTCTGCTTCAAAATCACAAGAACAGCAGACA 18224255 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | | | |||| ||| | | ||| |||||||| ||| || ||| ||| ||||||| || Sbjct 18224256 TTGCACGGTCAATAAAACTATGTCACTATGAACACTTTTCTTCCAGAAGGCAGTTATTCC 18224315 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18224316 TGTGGTAACTTTTCTG 18224331 Score = 167 bits (184), Expect = 4e-39 Identities = 157/196 (80%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18256298 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18256355 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| |||||||||||||| || ||||||||| || | | ||| ||| |||| Sbjct 18256356 ACTGGGTCAACAATCCAACGCTAGGTGAGTTCTGCTTCAAAATCACAAGAACAGCAGACA 18256415 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | | | |||| ||| | | ||| |||||||| ||| || ||| ||| ||||||| || Sbjct 18256416 TTGCACGGTCAATAAAACTATGTCACTATGAACACTTTTCTTCCAGAAGGCAGTTATTCC 18256475 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18256476 TGTGGTAACTTTTCTG 18256491 Score = 167 bits (184), Expect = 4e-39 Identities = 157/196 (80%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18307298 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18307355 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18307356 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18307415 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| |||||||| ||| || ||| ||| ||||||| || Sbjct 18307416 TTGCAGGGTCAATAAAACTATGTCACTATGAACACTTTCCTTCCAGAAGGCAGTTATTCC 18307475 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18307476 TGTGGTAACTTTTCTG 18307491 Score = 167 bits (184), Expect = 4e-39 Identities = 157/196 (80%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18366778 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18366835 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18366836 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18366895 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| |||||||| ||| || ||| ||| ||||||| || Sbjct 18366896 TTGCAGGGTCAATAAAACTATGTCACTATGAACACTTTCCTTCCAGAAGGCAGTTATTCC 18366955 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18366956 TGTGGTAACTTTTCTG 18366971 Score = 165 bits (182), Expect = 1e-38 Identities = 158/199 (79%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 || ||||||||| || | || ||||||||||| | ||||| || |||||||||||||| Sbjct 18294344 GTAATCAGTAGGT--AATCGAATCTGTCTCATGATGTTCTAATCC-AGCTCACGTTCCCT 18294400 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||| ||||| ||||||||||| || |||||||||||| || | | ||| ||| | Sbjct 18294401 ATTACTGGGTCAACAATCCAACCCTAGGTGAATTCTGCTTCAAAATCAGAAGAAAAGCAG 18294460 Query 150 ACATCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||| | ||| |||| ||| | | ||| |||||||| ||| || ||| ||| ||||||| Sbjct 18294461 ACATTGCAGGGTCAATAAAACTATGTCACTATGAACACTTTTCTTCCAGAAGGCAGTTAT 18294520 Query 209 CCCTGTGGTAACTTTTCTG 227 |||||||||||||||||| Sbjct 18294521 TCCTGTGGTAACTTTTCTG 18294539 Score = 163 bits (180), Expect = 5e-38 Identities = 195/260 (75%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18271988 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18272045 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||||||||||| || | | | | ||| |||| Sbjct 18272046 ACTGGGTCAACAATCCAACCCTAGGTGAATTCTGCTTCAAAATCACAAGGACAGCAGACA 18272105 Query 153 TCGAAGGATCAAAAAGCAAC-GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| || ||| || |||||||| ||| || ||| ||| ||||||| || Sbjct 18272106 TTGCAGGGTCAATAA--AACTGTTACTATGAACACTTATCTTCCAGAAGGCAGTTATTCC 18272163 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| || || | | ||| || | ||||||| | || Sbjct 18272164 TGTGGTAACTTTTCTGACAATTCCTACTTAAAAACCAGAAATTCAGAAGGATCTTCATGC 18272223 Query 272 CACACTTTCATGGTTTGTAT 291 | |||||||||||||||| Sbjct 18272224 CCTGCTTTCATGGTTTGTAT 18272243 Score = 159 bits (176), Expect = 6e-37 Identities = 158/199 (79%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18283908 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18283965 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18283966 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18284025 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| |||||||| || || ||| ||| ||||||| || Sbjct 18284026 TTGCAGGGTCAATAAAACTATGTCACTATGAACAGTT-TCTTCCAGAAGGCAGTTATTCC 18284084 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||||||||||||| || Sbjct 18284085 TGTGGTAACTTTTCTGACA 18284103 Score = 159 bits (176), Expect = 6e-37 Identities = 157/199 (79%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| | ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18289132 ATCAGTAGG-TAAAACGAGTCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18289189 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || || ||||||||| || | | ||| ||| |||| Sbjct 18289190 ACTGGGTCAACAATCCAACCCTAGGTGAGTTCTGCTTCAAAATCACAAGAACAGCAGACA 18289249 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| |||||||| ||| || ||| || ||||||| || Sbjct 18289250 TTGCAGGGTCAATAAAACTATGTCACTATGAACACTTTTCTTCCAGGAGGCAGTTATACC 18289309 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||||||||||||| || Sbjct 18289310 TGTGGTAACTTTTCTGACA 18289328 Score = 156 bits (172), Expect = 7e-36 Identities = 155/196 (79%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18234634 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18234691 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | | | ||| |||| Sbjct 18234692 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGGACAGCAGACA 18234751 Query 153 TCGAAGGATCAAAAAGCAAC-GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| || ||| || |||||||| ||| || ||| ||| ||||||| || Sbjct 18234752 TTGCAGGGTCAATAA--AACTGTTACTATGAACACTTATCTTCCAGAAGGCAGTTATTCC 18234809 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18234810 TGTGGTAACTTTTCTG 18234825 Score = 156 bits (172), Expect = 7e-36 Identities = 155/196 (79%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18266794 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18266851 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | | | ||| |||| Sbjct 18266852 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGGACAGCAGACA 18266911 Query 153 TCGAAGGATCAAAAAGCAAC-GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| || ||| || |||||||| ||| || ||| ||| ||||||| || Sbjct 18266912 TTGCAGGGTCAATAA--AACTGTTACTATGAACACTTATCTTCCAGAAGGCAGTTATTCC 18266969 Query 212 TGTGGTAACTTTTCTG 227 |||||||||||||||| Sbjct 18266970 TGTGGTAACTTTTCTG 18266985 Score = 147 bits (162), Expect = 4e-33 Identities = 155/199 (78%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18229437 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18229494 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18229495 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18229554 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| | ||||| || || ||| ||| ||||||| || Sbjct 18229555 TTGCAGGGTCAATAAAACTATGTCAC-CTGAACATTTTCCTTCCAGAAGGCAGTTATTCC 18229613 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||| ||||||||| || Sbjct 18229614 TGTGGTCACTTTTCTGACA 18229632 Score = 147 bits (162), Expect = 4e-33 Identities = 155/199 (78%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18244749 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18244806 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18244807 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18244866 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| | ||||| || || ||| ||| ||||||| || Sbjct 18244867 TTGCAGGGTCAATAAAACTATGTCAC-CTGAACATTTTCCTTCCAGAAGGCAGTTATTCC 18244925 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||| ||||||||| || Sbjct 18244926 TGTGGTCACTTTTCTGACA 18244944 Score = 147 bits (162), Expect = 4e-33 Identities = 155/199 (78%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| |||||| || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18261597 ATCAGTAGG-TAAAACGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18261654 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||| ||||||| || | | ||| ||| |||| Sbjct 18261655 ACTGGGTCAACAATCCAACCCTAGGTGAATCCTGCTTCAAAATCACAAGAACAGCAGACA 18261714 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| | ||||| || || ||| ||| ||||||| || Sbjct 18261715 TTGCAGGGTCAATAAAACTATGTCAC-CTGAACATTTTCCTTCCAGAAGGCAGTTATTCC 18261773 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||| ||||||||| || Sbjct 18261774 TGTGGTCACTTTTCTGACA 18261792 Score = 147 bits (162), Expect = 4e-33 Identities = 155/199 (78%), Gaps = 5/199 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| || | || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18312724 ATCAGTAGGT--AATCGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18312780 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||||||||||| || | | ||| ||| |||| Sbjct 18312781 ACTGGGTCAACAATCCAACCCTAGGTGAATTCTGCTTCAAAATCACAAGAACAGCAGACA 18312840 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| | ||||| ||| || ||| ||| ||||||| || Sbjct 18312841 TTGCAGGGTCAATAAAACTATGTCAC-CTGAACACTTTCCTTCCAGAAGGCAGTTATTCC 18312899 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||||||||||||| || Sbjct 18312900 TGTGGTAACTTTTCTGACA 18312918 Score = 147 bits (162), Expect = 4e-33 Identities = 155/199 (78%), Gaps = 5/199 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| || | || ||||||||||| | ||||| || ||||||| ||||||||| Sbjct 18372052 ATCAGTAGGT--AATCGAATCTGTCTCATGATGTTCTAATCC-AGCTCACATTCCCTATT 18372108 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||| ||||||||||| || |||||||||||| || | | ||| ||| |||| Sbjct 18372109 ACTGGGTCAACAATCCAACCCTAGGTGAATTCTGCTTCAAAATCACAAGAACAGCAGACA 18372168 Query 153 TCGAAGGATCAA-AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | | ||| |||| ||| | | ||| | ||||| ||| || ||| ||| ||||||| || Sbjct 18372169 TTGCAGGGTCAATAAAACTATGTCAC-CTGAACACTTTCCTTCCAGAAGGCAGTTATTCC 18372227 Query 212 TGTGGTAACTTTTCTGGCA 230 |||||||||||||||| || Sbjct 18372228 TGTGGTAACTTTTCTGACA 18372246 >seq80 Length=184226339 Score = 105 bits (116), Expect = 1e-20 Identities = 187/268 (70%), Gaps = 16/268 (6%) Strand=Plus/Minus Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 |||| ||||||||||||||||| || |||| | || || ||||||||||||| ||| Sbjct 3328571 ACGG-CATCAGTAGGGTAAAAC----CTATCTCCTAACAGTATAAACCCAGCTCATATTC 3328517 Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG-ATAGGAAGA 145 ||||||||||| |||| | | | | | ||| | || || ||||||| | Sbjct 3328516 CCTATTAGTGGATGAATTCTGCTTCAC-AATAGAAAT--------GTTTGAATAGGAAAA 3328466 Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 || ||||| || ||||||| | | | ||||||||| |||||| ||||| |||| Sbjct 3328465 GCAGACAT-TAAATATCAAAACGAGATGCTGCTATGAACACTTGGCCAATACAAGGCAGT 3328407 Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||| | || |||| ||||||| ||||| || | ||| | | | ||||||| Sbjct 3328406 TATTGCCGTAGTAATTTTTCTGATACCTCCTGCTTTAAACCCAAATAGTCAGAAGGATCC 3328347 Query 266 ATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| |||||||||||||| ||| Sbjct 3328346 TGAGGCCCTGCTTTCATGGTTTGTGTTC 3328319 Score = 105 bits (116), Expect = 1e-20 Identities = 187/268 (70%), Gaps = 16/268 (6%) Strand=Plus/Minus Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 |||| ||||||||||||||||| || |||| | || || ||||||||||||| ||| Sbjct 3404855 ACGG-CATCAGTAGGGTAAAAC----CTATCTCCTAACAGTATAAACCCAGCTCATATTC 3404801 Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG-ATAGGAAGA 145 ||||||||||| |||| | | | | | ||| | || || ||||||| | Sbjct 3404800 CCTATTAGTGGATGAATTCTGCTTCAC-AATAGAAAT--------GTTTGAATAGGAAAA 3404750 Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 || ||||| || ||||||| | | | ||||||||| |||||| ||||| |||| Sbjct 3404749 GCAGACAT-TAAATATCAAAACGAGATGCTGCTATGAACACTTGGCCAATACAAGGCAGT 3404691 Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||| | || |||| ||||||| ||||| || | ||| | | | ||||||| Sbjct 3404690 TATTGCCGTAGTAATTTTTCTGATACCTCCTGCTTTAAACCCAAATAGTCAGAAGGATCC 3404631 Query 266 ATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| |||||||||||||| ||| Sbjct 3404630 TGAGGCCCTGCTTTCATGGTTTGTGTTC 3404603 Score = 104 bits (114), Expect = 4e-20 Identities = 183/263 (70%), Gaps = 18/263 (7%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||| || ||||| || |||||||||||| ||| |||| ||| Sbjct 3322570 CATCAGTAGGGTAAAAC----CTATCTCACAACAGTCTAAACCCAGATCATATTCCTTAT 3322515 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA-TAGGAAGAGCCGA 150 |||||| |||| | | | | | ||| | || ||| |||||| ||| || Sbjct 3322514 TAGTGGATGAATTCTGCTTCACA-ATAGAAAT--------GTTTGAATAGGAAAAGCAGA 3322464 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| || | ||||||| | || ||||||| | |||||| ||||| ||||||| Sbjct 3322463 CATTAAAT-AGCAAAAAGAGATGTTGCTATGAGCACTTGGCCAATACAAGGCAGTTATTT 3322405 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 | ||||||| ||||||| ||||| || | ||| | | | ||||||| ||| Sbjct 3322404 CCGTGGTAATTTTTCTGACACCT---GCTTTAAACCCAAATAGTCAGAAGGATCCTGAGG 3322348 Query 271 CCACACTTTCATGGTTTGTATTC 293 || |||||||||||||| ||| Sbjct 3322347 CCCTGCTTTCATGGTTTGTGTTC 3322325 Score = 98.7 bits (108), Expect = 2e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 |||||||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 70404128 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTTAAACCG 70404187 Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | || | |||| || ||||| ||||||||| || |||||||| Sbjct 70404188 AAAAGGTCAGAAGGCTCATGAGGCCCCACTTTCATAGTCTGTATTCA 70404234 Score = 98.7 bits (108), Expect = 2e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 |||||||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 135812736 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTTAAACCG 135812795 Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | || | |||| || ||||| ||||||||| || |||||||| Sbjct 135812796 AAAAGGTCAGAAGGCTCATGAGGCCCCACTTTCATAGTCTGTATTCA 135812842 Score = 77.0 bits (84), Expect = 6e-12 Identities = 77/99 (78%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 ||||| | |||||||||||||||||||||||||| || || || | ||| | || Sbjct 40166862 CCACA-GACAGTTATCCCTGTGGTAACTTTTCTGATACTTCCTGCTTAAAACCCAAAAGG 40166920 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | |||||||| ||||| |||||||||||| |||||| Sbjct 40166921 TCAGAAGGATCGTAAGGCCCCACTTTCATGGTCTGTATT 40166959 >seq97 Length=173707219 Score = 104 bits (114), Expect = 4e-20 Identities = 183/263 (70%), Gaps = 18/263 (7%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||| || ||||| || |||||||||||| ||| |||| ||| Sbjct 325631 CATCAGTAGGGTAAAAC----CTATCTCACAACAGTCTAAACCCAGATCATATTCCTTAT 325686 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA-TAGGAAGAGCCGA 150 |||||| |||| | | | | | ||| | || ||| |||||| ||| || Sbjct 325687 TAGTGGATGAATTCTGCTTCACA-ATAGAAAT--------GTTTGAATAGGAAAAGCAGA 325737 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| || | ||||||| | || ||||||| | |||||| ||||| ||||||| Sbjct 325738 CATTAAAT-AGCAAAAAGAGATGTTGCTATGAGCACTTGGCCAATACAAGGCAGTTATTT 325796 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 | ||||||| ||||||| ||||| || | ||| | | | ||||| | ||| Sbjct 325797 CCGTGGTAATTTTTCTGACACCT---GCTTTAAACCCAAATAGTCAGAAGGACCCTGAGG 325853 Query 271 CCACACTTTCATGGTTTGTATTC 293 || ||||||||||||||| ||| Sbjct 325854 CCCTACTTTCATGGTTTGTGTTC 325876 Score = 104 bits (114), Expect = 4e-20 Identities = 183/263 (70%), Gaps = 18/263 (7%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||| || ||||| || |||||||||||| ||| |||| ||| Sbjct 331759 CATCAGTAGGGTAAAAC----CTATCTCACAACAGTCTAAACCCAGATCATATTCCTTAT 331814 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA-TAGGAAGAGCCGA 150 |||||| |||| | | | | | ||| | || ||| |||||| ||| || Sbjct 331815 TAGTGGATGAATTCTGCTTCACA-ATAGAAAT--------GTTTGAATAGGAAAAGCAGA 331865 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| || | ||||||| | || ||||||| | |||||| ||||| ||||||| Sbjct 331866 CATTAAAT-AGCAAAAAGAGATGTTGCTATGAGCACTTGGCCAATACAAGGCAGTTATTT 331924 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 | ||||||| ||||||| ||||| || | ||| | | | ||||||| ||| Sbjct 331925 CCGTGGTAATTTTTCTGACACCT---GCTTTAAACCCAAATAGTCAGAAGGATCCTGAGG 331981 Query 271 CCACACTTTCATGGTTTGTATTC 293 || |||||||||||||| ||| Sbjct 331982 CCCTGCTTTCATGGTTTGTGTTC 332004 >seq154 Length=133307652 Score = 100 bits (110), Expect = 5e-19 Identities = 87/107 (81%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 ||||||| |||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 8555154 TGGCTGCTACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCC 8555095 Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | || | |||||||| ||||| | |||||||||| |||||||| Sbjct 8555094 AAAAGGTCAGAAGGATCGTGAGGCC-CGCTTTCATGGTCTGTATTCA 8555049 Score = 87.8 bits (96), Expect = 3e-15 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 |||| ||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 21379442 TGGCAGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCC 21379501 Query 248 CGAGGGACTAAAGGATCGAT-AGGCCACACTTTCATGGTTTGTATTC 293 | || | | | || |||| ||||| ||||| ||||| ||||||| Sbjct 21379502 AAAAGGTC-AGAAGAACGATGAGGCCCCACTTCTATGGTCTGTATTC 21379547 >seq166 Length=122095297 Score = 89.7 bits (98), Expect = 9e-16 Identities = 84/106 (79%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 || |||||||||| |||||||||||||||||||||||||| ||||| | || ||| Sbjct 52650659 TGACTGCCACAAGTCAGTTATCCCTGTGGTAACTTTTCTGATACCTC-ATGCTTAAAACC 52650717 Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | || ||||| ||||| |||||||||||||||||| Sbjct 52650718 CAAAGGTCAGAAAGATCGTGAGGCCCTGCTTTCATGGTTTGTATTC 52650763 Score = 84.2 bits (92), Expect = 4e-14 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT-AT 180 ||||||||| ||||||||||||| ||||| ||| |||||||||| || ||| || Sbjct 72854009 TTCTGCTTCAA-ATGATAGGAAGAGTTGACATTGAAAGATCAAAAAGTGACAGTGCTTAT 72853951 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 ||| ||||| |||||||||||| ||||||||| Sbjct 72853950 GAATACTTGGGTGCCACAAGCCAATTATCCCTG 72853918 >seq117 Length=147991367 Score = 82.4 bits (90), Expect = 1e-13 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 ||||||| ||||||||||| || |||||||||||||||||| | | ||| | || Sbjct 17556826 CCACAAGTCAGTTATCCCTCTGTTAACTTTTCTGGCACCTCCTACTTAAAACCCAAAAGG 17556767 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||||||| ||||| || ||||||||| ||||||| Sbjct 17556766 TCAGAAGGATCGTAAGGCCTCATTTTCATGGTCTGTATTC 17556727 >seq129 Length=145729302 Score = 77.0 bits (84), Expect = 6e-12 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 17094341 TGGCTGCCACAAGCCATTTATCCCTGTGGTAACTTTTCTGACACCTC 17094295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854391840480