Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rattus_20norvegicus_20[refseq_20GCF_5F000001895.5_202014-07-01]
955 sequences; 2,870,184,193 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq232 473 4e-131
seq97 473 4e-131
seq1 473 4e-131
seq258 309 1e-81
seq271 293 8e-77
seq117 279 2e-72
seq189 273 7e-71
seq31 230 8e-58
seq206 221 4e-55
seq297 129 2e-27
seq55 95.1 4e-17
seq80 91.5 5e-16
seq154 77.0 1e-11
>seq232
Length=115493446
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 46525018 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 46524959
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 46524958 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 46524899
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 46524898 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 46524839
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46524838 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 46524779
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 46524778 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 46524722
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 46652197 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 46652138
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 46652137 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 46652078
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 46652077 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 46652018
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46652017 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 46651958
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 46651957 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 46651901
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 46654468 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 46654409
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 46654408 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 46654349
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 46654348 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 46654289
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46654288 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 46654229
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 46654228 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 46654172
>seq97
Length=173707219
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 91140825 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 91140766
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 91140765 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 91140706
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 91140705 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 91140646
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91140645 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 91140586
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 91140585 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 91140529
Score = 168 bits (186), Expect = 2e-39
Identities = 112/122 (92%), Gaps = 3/122 (2%)
Strand=Plus/Minus
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT-TACCCGCGCT 473
|||||||||||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct 76107744 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCCTTATATCCGCGCT 76107685
Query 474 TGGTTGAATTTCTTCACTTTGACAT--TCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
| |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||
Sbjct 76107684 TCATTGAATTTCTTCACTTTGACATTCTCAGAGCACTGGGAGGAAATCACATCGCGTCAA 76107625
Query 532 CA 533
||
Sbjct 76107624 CA 76107623
Score = 77.0 bits (84), Expect = 1e-11
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525
|||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 138649958 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAGTG 138650002
>seq1
Length=282763074
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 11974037 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 11973978
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 11973977 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 11973918
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 11973917 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 11973858
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11973857 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 11973798
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 11973797 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 11973741
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 11974917 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 11974858
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 11974857 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 11974798
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 11974797 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 11974738
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11974737 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 11974678
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 11974677 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 11974621
Score = 159 bits (176), Expect = 1e-36
Identities = 105/116 (91%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 126725183 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 126725124
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 126725123 CAGGGTCTTCTTTCTCGGCTGCTTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 126725068
Score = 82.4 bits (90), Expect = 2e-13
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70
||||| ||||||| ||||||| |||| ||| | |||| |||||||||| | | |||
Sbjct 217728274 TGCTCCACAGGAGGTTTCTGTCCTCCCTGAACTCGCCTTGGGACACCTGCATCACCATTT 217728333
Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| | | ||||| ||||||||||||||| || ||||
Sbjct 217728334 GGCAGGTGTACGGTCCCAGTCAAACTCCCCACCTGGCACTGTC 217728376
>seq258
Length=90668790
Score = 309 bits (342), Expect = 1e-81
Identities = 186/196 (95%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 338 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
||| || |||||||||| |||||||| |||||||||||||||||||||| ||||||||||
Sbjct 68296485 TTGCCTCTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCAT 68296426
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68296425 ACGCATCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 68296366
Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 68296365 GCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 68296306
Query 518 TCACATTGCGTCAACA 533
|||||| |||||||||
Sbjct 68296305 TCACATCGCGTCAACA 68296290
Score = 77.0 bits (84), Expect = 1e-11
Identities = 80/106 (75%), Gaps = 7/106 (7%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 90603119 TTTTGCTCCACCGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACCA 90603060
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| || | ||||||||||||||| || ||||
Sbjct 90603059 TTTGACAG-------GCGTAGGTCAAACTCCCCACCTGGCACTGTC 90603021
>seq271
Length=90843779
Score = 293 bits (324), Expect = 8e-77
Identities = 202/227 (89%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||| ||||| |||||||||||||||| | ||||| |||||| ||||||||| |||| ||
Sbjct 57194462 CTTCCTTCCCTGCTGATTCCGCCAAGCGCATTCCCCTGGCTGAGGTTTCGCTGGATAATA 57194521
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
| ||||||||||||||| || ||| |||||||||| |||||||||||||| || ||||
Sbjct 57194522 GGTAGGGACAGTGGGAAACTTGTTCATCCATTCATAGTCGTCACTAATTAGACGATGAGG 57194581
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACT-CCCGCCGTTTACCCGCGCTTGGTTGAA 481
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||
Sbjct 57194582 CATTTGGCTACCTTAAGAGACTCATAGTTACTCCCCGCCATTTACCCGCGCTTCCTTGAA 57194641
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528
||||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct 57194642 TTTCTTCACTTTGACATTCAGAGCATTGGGCAGAAATCGCATTGTGT 57194688
>seq117
Length=147991367
Score = 279 bits (308), Expect = 2e-72
Identities = 175/188 (93%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 30634966 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 30634907
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 30634906 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 30634847
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 30634846 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAA--AGATG 30634789
Query 417 ACGAGGCA 424
||||||||
Sbjct 30634788 ACGAGGCA 30634781
>seq189
Length=90463843
Score = 273 bits (302), Expect = 7e-71
Identities = 237/293 (81%), Gaps = 7/293 (2%)
Strand=Plus/Minus
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
|| ||||||||||| ||||||| ||| ||||| ||| | |||||||||
Sbjct 21473826 CCTACTTATTCTACGCCTCTCATGTCTCTTCACTGTGTCAAAATAGAGTCAATG------ 21473773
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|||| ||||||| || |||||| | |||| | |||||||| || ||||||| || ||
Sbjct 21473772 GGGTATTCTTTCTCCTCTGATTATGGCAAGTCTGTTCCCTTT-CTCTGGTTTCACTGAAT 21473714
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||| |||||| |||||||||||| || ||||||||||| ||||||||||||||||
Sbjct 21473713 AGTAGGTAGGGATAGTGGGAATCTCTTTCATCCATTCATGTAAGTCACTAATTAGATGAT 21473654
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||| ||||||||||| || |||||| | |||| ||
Sbjct 21473653 GAGGCATTTGGCTACCTTAAGAGAGTCCTAGTTACTCCCACCATTTACCTGTGCTTCATT 21473594
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
||||||||||||||||||||||| |||| | ||||||| ||| | | |||||
Sbjct 21473593 GAATTTCTTCACTTTGACATTCAAAGCAGTTGGCAGAAGTCATGTAGTGTCAA 21473541
>seq31
Length=266435125
Score = 230 bits (254), Expect = 8e-58
Identities = 190/231 (82%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
||||||||||||||| || | |||||||||||| | ||||| | | |||||| || |||
Sbjct 100553324 GACTAGAGTCAAGCTTAATAAGGTCTTCTTTCCTCAGTGATTTCACGAAGCCCTTTTCCT 100553265
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
|| |||| ||| | |||||||| ||||| ||| ||||||| || |||||||| ||
Sbjct 100553264 AGGGTGTGATTTTATTTGATAGTAGGTAGGGGTAGTAGGAATCTTTTTCATCCATTCGTG 100553205
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458
| |||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||| |
Sbjct 100553204 TGTGTCAGTAATTAGATGACAAGGCATTTGGCTATCTTAACAGAGTCATAGTTACTCCTG 100553145
Query 459 CCGTTTACCCGCG--CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||| ||| ||||||| |||| ||||||||||||||||||
Sbjct 100553144 TTGTTTACCCGCGCACTTCATTGAATTACTTCCCTTTGACATTCAGAGCAC 100553094
Score = 77.0 bits (84), Expect = 1e-11
Identities = 47/50 (94%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 91952694 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCCTGTCAACA 91952645
>seq206
Length=52716770
Score = 221 bits (244), Expect = 4e-55
Identities = 229/297 (77%), Gaps = 11/297 (4%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18289711 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18289770
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| |||| ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18289771 GCTTCATTCCCTGCTAATTCAGCCTAGCTTGTTCCCTTGGATGGGGTTTTGAGGGATAGT 18289830
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | ||||| |||| ||||
Sbjct 18289831 AGGTAGAGACAGTGGGAATCTTGTTCATCCATCCATGTGTGTCACAGATTAAATGA---- 18289886
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18289887 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18289940
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18289941 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18289997
Score = 208 bits (230), Expect = 2e-51
Identities = 225/297 (76%), Gaps = 11/297 (4%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18272568 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18272627
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18272628 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTGGATGGGGTTTTGAGGGATAGT 18272687
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| || || |||| | ||||| |||| |||| ||
Sbjct 18272688 AGGTAGAGACAGTGGGAATCTTGTTCATTCAACCATGTGTGTCACAGATTAAATGAGGA- 18272746
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18272747 ------GACTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18272797
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18272798 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18272854
Score = 206 bits (228), Expect = 9e-51
Identities = 227/297 (76%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18235214 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18235273
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18235274 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18235331
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18235332 AGGTAGAGACAGTGGGAATCTGGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18235386
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18235387 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18235440
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18235441 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18235497
Score = 206 bits (228), Expect = 9e-51
Identities = 227/297 (76%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18267374 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18267433
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18267434 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18267491
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18267492 AGGTAGAGACAGTGGGAATCTGGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18267546
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18267547 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18267600
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18267601 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18267657
Score = 201 bits (222), Expect = 4e-49
Identities = 226/297 (76%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18224720 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18224779
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| |||| ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18224780 GCTTCATTCCCTGCTAATTCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18224837
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| || |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18224838 AGGGAGAGACAGTGGGAATCTTGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18224892
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | | |||| |||||
Sbjct 18224893 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTTCTCTGCTTCATTGAA 18224946
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18224947 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18225003
Score = 201 bits (222), Expect = 4e-49
Identities = 226/297 (76%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18256880 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18256939
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| |||| ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18256940 GCTTCATTCCCTGCTAATTCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18256997
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| || |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18256998 AGGGAGAGACAGTGGGAATCTTGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18257052
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | | |||| |||||
Sbjct 18257053 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTTCTCTGCTTCATTGAA 18257106
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18257107 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18257163
Score = 199 bits (220), Expect = 1e-48
Identities = 223/297 (75%), Gaps = 11/297 (4%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | ||||||||||| |||||||||||
Sbjct 18284488 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAGGCTCAACAGGG 18284547
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| || |||||||||| || ||||| | ||||||
Sbjct 18284548 GCTTCATTCCCTGCTAATCCAGCCTTGCTTGTTCCCTTGGATGGGGTTTTGAGGGATAGT 18284607
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||||| |||||||||||||| ||| ||||| |||| | ||||| ||| |||| ||
Sbjct 18284608 AGATATAGACAGTGGGAATCTTGTTCATCCAACCATGTGTGTCACAGATTGAATGAGGA- 18284666
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18284667 ------GACTATCTTAAGAGAGTCATAGTTCTTC---CCATCTTCCTGTCCTTCATTGAA 18284717
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18284718 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18284774
Score = 197 bits (218), Expect = 5e-48
Identities = 224/297 (75%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18307880 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18307939
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||| | || ||||| | ||||||
Sbjct 18307940 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTTGATGGGGTTT--TTGGATAGT 18307997
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | || || |||| |||| ||
Sbjct 18307998 AGGTAGAGACAGTGGGAATCTGGTTCATCCATCCATGTGTGT-ACAGATTAAATGAGGA- 18308055
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18308056 ------TCCTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18308106
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18308107 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18308163
Score = 197 bits (218), Expect = 5e-48
Identities = 223/295 (76%), Gaps = 13/295 (4%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18354408 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18354467
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18354468 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18354525
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18354526 AGGTAGAGACAGTGGGAATCTTGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18354580
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18354581 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18354634
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
||||||||||||||||||| | | |||| ||||||||| | | |||||| ||
Sbjct 18354635 TTTCTTCACTTTGACATTCTGCTTAGTGGGAAGAAATCACTTCACATCAACACCA 18354689
Score = 197 bits (218), Expect = 5e-48
Identities = 224/297 (75%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18367360 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18367419
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||| | || ||||| | ||||||
Sbjct 18367420 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTTGATGGGGTTT--TTGGATAGT 18367477
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| ||| |||||||||||||| ||| |||||| |||| | || || |||| |||| ||
Sbjct 18367478 AGGTAGAGACAGTGGGAATCTGGTTCATCCATCCATGTGTGT-ACAGATTAAATGAGGA- 18367535
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18367536 ------TCCTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18367586
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||||||||||||||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18367587 TTTCTTCACTTTGACATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18367643
Score = 192 bits (212), Expect = 2e-46
Identities = 214/283 (76%), Gaps = 12/283 (4%)
Strand=Plus/Plus
Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315
||||| ||| ||||| | | ||||||||||||||||||||||| |||| ||||| ||
Sbjct 18230032 TCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGGGCTTCATTCCCTGC 18230091
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
| |||| ||| ||| || ||| ||| || ||||| | |||||||| ||| |||||||
Sbjct 18230092 TAATTCAGCCTAGCTTGTACCCGTGGATGGGGTTTTGAGGGATAGTAGGTAGAGACAGTG 18230151
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||| |||||| |||| || || |||| |||| || ||| ||
Sbjct 18230152 GGAATCTTGTTCATCCATCCATGTATGT-ACAGATTAAATGAGGA-------TCCTATCT 18230203
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||| || || | | | |||| |||||||||||||||||||
Sbjct 18230204 TAAGAGAGTCATAGTTATTC---CCATATTTCTCTGCTTCATTGAATTTCTTCACTTTGA 18230260
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18230261 CATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18230303
Score = 192 bits (212), Expect = 2e-46
Identities = 214/283 (76%), Gaps = 12/283 (4%)
Strand=Plus/Plus
Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315
||||| ||| ||||| | | ||||||||||||||||||||||| |||| ||||| ||
Sbjct 18245344 TCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGGGCTTCATTCCCTGC 18245403
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
| |||| ||| ||| || ||| ||| || ||||| | |||||||| ||| |||||||
Sbjct 18245404 TAATTCAGCCTAGCTTGTACCCGTGGATGGGGTTTTGAGGGATAGTAGGTAGAGACAGTG 18245463
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||| |||||| |||| || || |||| |||| || ||| ||
Sbjct 18245464 GGAATCTTGTTCATCCATCCATGTATGT-ACAGATTAAATGAGGA-------TCCTATCT 18245515
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||| || || | | | |||| |||||||||||||||||||
Sbjct 18245516 TAAGAGAGTCATAGTTATTC---CCATATTTCTCTGCTTCATTGAATTTCTTCACTTTGA 18245572
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18245573 CATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18245615
Score = 192 bits (212), Expect = 2e-46
Identities = 214/283 (76%), Gaps = 12/283 (4%)
Strand=Plus/Plus
Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315
||||| ||| ||||| | | ||||||||||||||||||||||| |||| ||||| ||
Sbjct 18262192 TCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGGGCTTCATTCCCTGC 18262251
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
| |||| ||| ||| || ||| ||| || ||||| | |||||||| ||| |||||||
Sbjct 18262252 TAATTCAGCCTAGCTTGTACCCGTGGATGGGGTTTTGAGGGATAGTAGGTAGAGACAGTG 18262311
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||| |||||| |||| || || |||| |||| || ||| ||
Sbjct 18262312 GGAATCTTGTTCATCCATCCATGTATGT-ACAGATTAAATGAGGA-------TCCTATCT 18262363
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||| || || | | | |||| |||||||||||||||||||
Sbjct 18262364 TAAGAGAGTCATAGTTATTC---CCATATTTCTCTGCTTCATTGAATTTCTTCACTTTGA 18262420
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18262421 CATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18262463
Score = 192 bits (212), Expect = 2e-46
Identities = 222/295 (75%), Gaps = 13/295 (4%)
Strand=Plus/Plus
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
||||||| || ||||| ||| ||||| | | |||||||||||||||||||||||
Sbjct 18294928 ACTTATTGCACTGTTCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGG 18294987
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361
|||| ||||| ||| || | ||| ||| |||||||||| || ||||| | ||||||
Sbjct 18294988 GCTTCATTCCCTGCTAATCCAGCCTAGCTTGTTCCCTTGGATGGGGTTT--TTGGATAGT 18295045
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
|| || |||||||||||||| ||| |||||| |||| | || || |||| ||||
Sbjct 18295046 AGGGAGAGACAGTGGGAATCTTGTTCATCCATCCATGTGTGT-ACAGATTAAATGA---- 18295100
Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481
| ||| ||| |||||||||||||||||| || || | | || | ||| |||||
Sbjct 18295101 GGATT---CTATCTTAAGAGAGTCATAGTTCTTC---CCATATTCCTGTCCTTCATTGAA 18295154
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
||||||||||||||||||| | | |||| ||||||||| | | |||||| ||
Sbjct 18295155 TTTCTTCACTTTGACATTCTGCTTAGTGGGAAGAAATCACTTCACATCAACACCA 18295209
Score = 181 bits (200), Expect = 3e-43
Identities = 213/283 (75%), Gaps = 14/283 (5%)
Strand=Plus/Plus
Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315
||||| ||| ||||| | | ||||||||||||||||||||||| |||| ||||| ||
Sbjct 18313318 TCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGGGCTTCATTCCCTGC 18313377
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
| || | ||| ||| |||||||| | || ||||| | |||||||| || |||||||
Sbjct 18313378 TAATCCAGCCTAGCTTGTTCCCTTTGATGGGGTTT--TTGGATAGTAGGGAGAGACAGTG 18313435
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||| |||||| |||| || || |||| |||| | ||| ||| ||
Sbjct 18313436 GGAATCTGGTTCATCCATCCATGTATGT-ACAGATTAAATGA----GGATT---CTATCT 18313487
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
|||||||||||||||| || || | | | || | |||||||||||||||||||
Sbjct 18313488 TAAGAGAGTCATAGTTCTTC---CCATATTTCTCTGCCTCATTGAATTTCTTCACTTTGA 18313544
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18313545 CATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18313587
Score = 181 bits (200), Expect = 3e-43
Identities = 213/283 (75%), Gaps = 14/283 (5%)
Strand=Plus/Plus
Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315
||||| ||| ||||| | | ||||||||||||||||||||||| |||| ||||| ||
Sbjct 18372646 TCTCATGTCTCTTCACCATGCTAGACTAGAGTCAAGCTCAACAGGGGCTTCATTCCCTGC 18372705
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
| || | ||| ||| |||||||| | || ||||| | |||||||| || |||||||
Sbjct 18372706 TAATCCAGCCTAGCTTGTTCCCTTTGATGGGGTTT--TTGGATAGTAGGGAGAGACAGTG 18372763
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||| |||||| |||| || || |||| |||| | ||| ||| ||
Sbjct 18372764 GGAATCTGGTTCATCCATCCATGTATGT-ACAGATTAAATGA----GGATT---CTATCT 18372815
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
|||||||||||||||| || || | | | || | |||||||||||||||||||
Sbjct 18372816 TAAGAGAGTCATAGTTCTTC---CCATATTTCTCTGCCTCATTGAATTTCTTCACTTTGA 18372872
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
||||| | ||||||| ||||||||| | | |||||| ||||
Sbjct 18372873 CATTCTGCTCACTGGGAAGAAATCACTTCACATCAACACTCAC 18372915
>seq297
Length=62275575
Score = 129 bits (142), Expect = 2e-27
Identities = 147/199 (74%), Gaps = 19/199 (10%)
Strand=Plus/Plus
Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403
|||||| | || |||||| |||||| ||||||||||||||| | |||||||| ||
Sbjct 59052522 GTGGTTCCACTGCATAGTACGTAGGGAGAGTGGGAATCTCGTTCACCCATTCATTCG--- 59052578
Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463
|||| |||||| ||||||| || |||| ||||| |||| ||| ||| |
Sbjct 59052579 -----------TGACAAGGCATCTGGCTACGTTCAGAGGGTCATCGTTATTCCTGCCACT 59052627
Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC----ACTGGGCAGAAATC 519
||| | |||| |||||| ||||||||||||||| || ||| || |||||||||||
Sbjct 59052628 TACACACGCTCCATTGAATCTCTTCACTTTGACATCCACAGCATCGACCGGGCAGAAATC 59052687
Query 520 ACATTGCGTCAACATCACT 538
|||| | ||||| ||||
Sbjct 59052688 ACATCCTGCCAACA-CACT 59052705
>seq55
Length=177699992
Score = 95.1 bits (104), Expect = 4e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| || | | |||||||||| ||| ||||
Sbjct 102594760 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGTGCTCACCTTAGGACAACTGTGTTACT 102594819
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
| || |||| ||| | ||||||| ||||||||||||||| || ||||
Sbjct 102594820 GATTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGGCACTGTC 102594866
>seq80
Length=184226339
Score = 91.5 bits (100), Expect = 5e-16
Identities = 82/102 (80%), Gaps = 1/102 (1%)
Strand=Plus/Plus
Query 12 GCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTA 71
|||| ||||||| ||||||| |||| |||| |||| |||||| ||||||| ||||
Sbjct 40166998 GCTCCACAGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTTGGACAC-TGCGTTACTGTTTC 40167056
Query 72 ACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| ||| || ||||| ||||||||||||||| || ||||
Sbjct 40167057 ACAGGTGTACCATCCCAGTCAAACTCCCCACCTGGCACTGTC 40167098
Score = 80.6 bits (88), Expect = 9e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72
||| || |||| ||||||| || | |||| | ||||||||||| ||| ||| |||| |
Sbjct 70404273 CTCCACGGGAGGTTTCTGTCCTTCCTGAGCTCACCTTAGGACAC-TGCTTTAACGTTTCA 70404331
Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| || |||| ||||||||||||||| || ||||
Sbjct 70404332 CAGGTGTACCATACCAGTCAAACTCCCCACCTGGCACTGTC 70404372
Score = 80.6 bits (88), Expect = 9e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72
||| || |||| ||||||| || | |||| | ||||||||||| ||| ||| |||| |
Sbjct 135812881 CTCCACGGGAGGTTTCTGTCCTTCCTGAGCTCACCTTAGGACAC-TGCTTTAACGTTTCA 135812939
Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| || |||| ||||||||||||||| || ||||
Sbjct 135812940 CAGGTGTACCATACCAGTCAAACTCCCCACCTGGCACTGTC 135812980
Score = 77.0 bits (84), Expect = 1e-11
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||| | || |||| |||||||||| |||| |||| | ||| ||||||||| | |||
Sbjct 3328286 TCTTCTCTTCCACAGAAGATTTCTGTCCTCCCTGAGCTCACCTAAGGACACCTACATTAA 3328227
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112
| |||| || | | | | ||||| ||| ||||||||||| || |||
Sbjct 3328226 AGGTTAATAGGTTTACTGTCCCAGTCAATCTCCCCACCTGGCACTGT 3328180
Score = 77.0 bits (84), Expect = 1e-11
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||| | || |||| |||||||||| |||| |||| | ||| ||||||||| | |||
Sbjct 3404570 TCTTCTCTTCCACAGAAGATTTCTGTCCTCCCTGAGCTCACCTAAGGACACCTACATTAA 3404511
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112
| |||| || | | | | ||||| ||| ||||||||||| || |||
Sbjct 3404510 AGGTTAATAGGTTTACTGTCCCAGTCAATCTCCCCACCTGGCACTGT 3404464
>seq154
Length=133307652
Score = 77.0 bits (84), Expect = 1e-11
Identities = 77/99 (78%), Gaps = 1/99 (1%)
Strand=Plus/Plus
Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79
|||| | ||||| ||| |||| |||||||||| ||||||| ||| |||| |||
Sbjct 21379594 GGAGGTGTCTGTCCTCACTGAGCTTGTCTTAGGACAC-TGCGTTACCTTTTCACAGGTGT 21379652
Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAA 118
|| ||||| ||||||||||||||| || |||||||||
Sbjct 21379653 ACCATCCCAGTCAAACTCCCCACCTGGCACTGTCATCAA 21379691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635184383840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |