Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3219 381 9e-104
seq208 95.1 2e-17
>seq3219
Length=1860
Score = 381 bits (422), Expect = 9e-104
Identities = 242/257 (94%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
Sbjct 1836 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 1779
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1778 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATT 1719
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1718 ACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 1659
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1658 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAAC 1599
Query 240 GGCCAT-CTCCCTCGAA 255
||| || |||||| ||
Sbjct 1598 GGCGATAGTCCCTCTAA 1582
>seq208
Length=6078508
Score = 95.1 bits (104), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 3/208 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||| | || ||||| | || || ||||| ||||||||| |||||| |
Sbjct 5101750 GTACAAAGGGCAGGGGCTTAATCAACACAAGTTT-ATGACCTGCGCTTACTGGGAATT-C 5101693
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | || ||||||||| |||||||||| || ||||| | ||
Sbjct 5101692 CTTGTTCATGGGGAATAATTGCAATCCCTGATCCCCATCATGAGTGGGGTTCAACGGGTT 5101633
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||||| ||| ||| | || | ||| |||||||| || |||
Sbjct 5101632 ACCTGTACCTGCCGGTGTAGGGTAGGCACATGCTGAGCCAGGCAGTGTAGTACGTGTGTA 5101573
Query 180 GCCCAGAACATCTAAGGGCATCACAGAC 207
|||| ||||||||||||||||||||||
Sbjct 5101572 GCCCCCAACATCTAAGGGCATCACAGAC 5101545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751895219845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |