Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3219 381 9e-104 seq208 95.1 2e-17 >seq3219 Length=1860 Score = 381 bits (422), Expect = 9e-104 Identities = 242/257 (94%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct 1836 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 1779 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1778 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATT 1719 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 1718 ACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 1659 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1658 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAAC 1599 Query 240 GGCCAT-CTCCCTCGAA 255 ||| || |||||| || Sbjct 1598 GGCGATAGTCCCTCTAA 1582 >seq208 Length=6078508 Score = 95.1 bits (104), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| | || ||||| | || || ||||| ||||||||| |||||| | Sbjct 5101750 GTACAAAGGGCAGGGGCTTAATCAACACAAGTTT-ATGACCTGCGCTTACTGGGAATT-C 5101693 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 || ||| | | || ||||||||| |||||||||| || ||||| | || Sbjct 5101692 CTTGTTCATGGGGAATAATTGCAATCCCTGATCCCCATCATGAGTGGGGTTCAACGGGTT 5101633 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | ||||| ||| ||| | || | ||| |||||||| || ||| Sbjct 5101632 ACCTGTACCTGCCGGTGTAGGGTAGGCACATGCTGAGCCAGGCAGTGTAGTACGTGTGTA 5101573 Query 180 GCCCAGAACATCTAAGGGCATCACAGAC 207 |||| |||||||||||||||||||||| Sbjct 5101572 GCCCCCAACATCTAAGGGCATCACAGAC 5101545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751895219845