Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3219 237 3e-60 seq560 104 4e-20 seq939 96.9 6e-18 >seq3219 Length=1860 Score = 237 bits (262), Expect = 3e-60 Identities = 202/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 700 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 759 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | | || | ||||||||||| Sbjct 760 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGCACAGGAGTAATGATTAA 818 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 819 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 878 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 879 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 937 Query 314 AGGGG 318 |||| Sbjct 938 GGGGG 942 >seq560 Length=2821508 Score = 104 bits (114), Expect = 4e-20 Identities = 160/226 (71%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131 ||||||||| ||||||||||||||| | ||||| ||| | || | || || Sbjct 1734232 TTTACTTTGGAAAAATTAGAGTGTTTGATGCAGGATCAAGCTGCTGCATTCGGCAG-ATA 1734290 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 | |||||||||||||| | |||||| |||||||| || | | || | || |||||| Sbjct 1734291 CACTAATAGAATAGGACTTCTGGTTCTGCTTTGTTGGCTTTTGGAACTGAAGTCATGATT 1734350 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 || | |||| ||| |||| || | ||| | ||| ||||||||||||| |||| | | Sbjct 1734351 AAAAAGGATGGTCCTGGGTATCGGAATTAAGTTGCTAGAGGTGAAATTCGTGGACCTTTG 1734410 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 |||| || | | | |||| || ||||| || |||| ||||| Sbjct 1734411 CAAGATGGACCAGAGTGGAAGCATTTGCCAAGAATATTTTTATTAA 1734456 >seq939 Length=370934 Score = 96.9 bits (106), Expect = 6e-18 Identities = 177/256 (69%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 49 CTGGGTGTGCCGGGGAGCCAG-GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107 ||| |||| || || ||| | | | |||||| ||||| ||||||| ||||||||||||| Sbjct 236453 CTGAGTGTCCCATGGGGCCTGAGGCATTTACTCTGAAACAATTAGAATGTTCAAAGCAGG 236512 Query 108 C---CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164 | | | ||||| ||| |||||||| ||||| ||| | | |||||||| || Sbjct 236513 CTGGAGTCACATAGATACAGAAGCCAGGAATAATGGAATAAGAC-TACAGTTCTATTCTG 236571 Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224 ||||||||| | || | | || ||||| ||| |||| | ||| | |||| | Sbjct 236572 TTGGTTTCTGGAACTGAGGGCATAATTAAGAGGAATAGCCAGGGACATTCATATTGCAGC 236631 Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 | |||||||||||||||| | | |||| || | | ||| || ||||| Sbjct 236632 ACTACAGGTGAAATTCTTGGACTGGTGCAAGATGGACAAGAGTAAAATTATTTGCCAAGA 236691 Query 285 ATGTTTTCATTAATCA 300 |||||||||||| ||| Sbjct 236692 ATGTTTTCATTACTCA 236707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915068366784