Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq3219 237 3e-60
seq560 104 4e-20
seq939 96.9 6e-18
>seq3219
Length=1860
Score = 237 bits (262), Expect = 3e-60
Identities = 202/245 (82%), Gaps = 3/245 (1%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| ||| | |||| | ||||||||||||||
Sbjct 700 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 759
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | |||||| | |||| ||||| |||||| | | || | |||||||||||
Sbjct 760 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGCACAGGAGTAATGATTAA 818
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||| ||||||||| | ||||| || |||||||||||||||||||||||||| |
Sbjct 819 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 878
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||| ||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct 879 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 937
Query 314 AGGGG 318
||||
Sbjct 938 GGGGG 942
>seq560
Length=2821508
Score = 104 bits (114), Expect = 4e-20
Identities = 160/226 (71%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131
||||||||| ||||||||||||||| | ||||| ||| | || | || ||
Sbjct 1734232 TTTACTTTGGAAAAATTAGAGTGTTTGATGCAGGATCAAGCTGCTGCATTCGGCAG-ATA 1734290
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
| |||||||||||||| | |||||| |||||||| || | | || | || ||||||
Sbjct 1734291 CACTAATAGAATAGGACTTCTGGTTCTGCTTTGTTGGCTTTTGGAACTGAAGTCATGATT 1734350
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|| | |||| ||| |||| || | ||| | ||| ||||||||||||| |||| | |
Sbjct 1734351 AAAAAGGATGGTCCTGGGTATCGGAATTAAGTTGCTAGAGGTGAAATTCGTGGACCTTTG 1734410
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297
|||| || | | | |||| || ||||| || |||| |||||
Sbjct 1734411 CAAGATGGACCAGAGTGGAAGCATTTGCCAAGAATATTTTTATTAA 1734456
>seq939
Length=370934
Score = 96.9 bits (106), Expect = 6e-18
Identities = 177/256 (69%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 49 CTGGGTGTGCCGGGGAGCCAG-GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107
||| |||| || || ||| | | | |||||| ||||| ||||||| |||||||||||||
Sbjct 236453 CTGAGTGTCCCATGGGGCCTGAGGCATTTACTCTGAAACAATTAGAATGTTCAAAGCAGG 236512
Query 108 C---CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164
| | | ||||| ||| |||||||| ||||| ||| | | |||||||| ||
Sbjct 236513 CTGGAGTCACATAGATACAGAAGCCAGGAATAATGGAATAAGAC-TACAGTTCTATTCTG 236571
Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224
||||||||| | || | | || ||||| ||| |||| | ||| | |||| |
Sbjct 236572 TTGGTTTCTGGAACTGAGGGCATAATTAAGAGGAATAGCCAGGGACATTCATATTGCAGC 236631
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
| |||||||||||||||| | | |||| || | | ||| || |||||
Sbjct 236632 ACTACAGGTGAAATTCTTGGACTGGTGCAAGATGGACAAGAGTAAAATTATTTGCCAAGA 236691
Query 285 ATGTTTTCATTAATCA 300
|||||||||||| |||
Sbjct 236692 ATGTTTTCATTACTCA 236707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915068366784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |