Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1141 98.7 4e-18
seq2828 91.5 6e-16
seq726 89.7 2e-15
seq2848 75.2 5e-11
>seq1141
Length=1003051
Score = 98.7 bits (108), Expect = 4e-18
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 994587 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 994528
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
| ||| ||||||||||| ||||||| || | ||||| ||||||| ||||||
Sbjct 994527 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG 994471
>seq2828
Length=6275
Score = 91.5 bits (100), Expect = 6e-16
Identities = 97/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | | || ||||| |||||||||||||||||| ||| |||||||||||| ||
Sbjct 1942 GAGCACACGTATTAGGACCTGAAAGATGGTGAACTATGTCTGGGAAGGGTGAAGCCAAAG 2001
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||| | ||||||||| | | ||| ||| |||||||| | || || | || |||
Sbjct 2002 GAAAAT-TGGTGGAGGTCTGTAATGGTCCTGATGTGCAAATTGGTCATCTGACCTGTGTA 2060
Query 675 TAGGGGC 681
|||||||
Sbjct 2061 TAGGGGC 2067
>seq726
Length=2641983
Score = 89.7 bits (98), Expect = 2e-15
Identities = 60/66 (91%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1523445 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 1523386
Query 624 G-TGGA 628
| ||||
Sbjct 1523385 GCTGGA 1523380
>seq2848
Length=2476
Score = 75.2 bits (82), Expect = 5e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | | || ||||| |||||||||||||||||| || | |||||||||| ||
Sbjct 1443 GAGCACACGTATTAGGACCTGAAAGATGGTGAACTATGTCTTGGAACGGTGAAGCCAAAG 1502
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655
|||||| ||||||||| | | ||| ||| ||||||||
Sbjct 1503 GAAACT-TGGTGGAGGTCTGTAAAGGTCCTGATGTGCAAAT 1542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079691484650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |