Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3219 300 3e-79
seq321 134 2e-29
seq119 118 2e-24
>seq3219
Length=1860
Score = 300 bits (332), Expect = 3e-79
Identities = 224/260 (86%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1633
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 1632 ACCTGTTATTGCCTCAAACTTCCGTCGCCTAAACGGCGATAGTCCCTCTAAGAAGCTAGC 1573
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 1572 TGCGGAGGGATGGCTCCGCTTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 1513
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1512 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 1453
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 1452 GAAAGAGCTCTCAGTCTGTC 1433
>seq321
Length=5251196
Score = 134 bits (148), Expect = 2e-29
Identities = 94/105 (90%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| ||| |||| |||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 3020529 GTCTCATTCATTATTGGAATTAACCAGACAAATCACTCCACCAGCTAAGAATGGCCATGC 3020470
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTA---TCAAT-CTGTCC 259
||||||||||| ||||||||||||||| || ||||| ||||||
Sbjct 3020469 ACCACCACCCACAGAATCAAGAAAGAGATATTGTCAATCCTGTCC 3020425
>seq119
Length=4455893
Score = 118 bits (130), Expect = 2e-24
Identities = 171/237 (72%), Gaps = 12/237 (5%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
|||| |||||| | || | | |||||| |||||||||||||||| ||||| | ||||
Sbjct 185196 GTCACTGTAGCACATGTACAGTCCCAGA-CATCTAAGGGCATCACCAACCTGCTGTTGCT 185254
Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133
||| || | |||| | ||| | |||||||| || || | | | || |||
Sbjct 185255 --AAATCTCGGATAGCTGAACACCACTTGTCCCTCTTAGGAGTTTGAAA--ATGCAGAGT 185310
Query 134 CG------ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| ||| ||| |||||| | | ||||| |||| || |||||| |||||||
Sbjct 185311 TGGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCGATACTGGAATTTACCAGAC 185370
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244
||||| ||||||||| |||||| ||||| ||||| ||||||| |||||||||||||
Sbjct 185371 AAATCCCTCCACCAAGTAAGAATGGCCACACACCAACACCCATGGAATCAAGAAAGA 185427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796688977623
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |