Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13] 14,383 sequences; 2,372,553,907 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq671 183 5e-44 seq542 84.2 4e-14 >seq671 Length=1096571 Score = 183 bits (202), Expect = 5e-44 Identities = 164/205 (80%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||| |||||||||||||| || ||||| ||||||| ||| ||| | |||||||| Sbjct 42011 ATCAGTAAGGTAAAACTAACCTATCCCATGATGGTCTAATCCCGACTCTCCCTCCCTATT 41952 Query 93 AGTGGGTGAACAAT---CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | || |||| ||| |||| |||| ||||||| |||| ||||||||||||| | Sbjct 41951 AATGAATGAATAATTCACCAATGCTTGGTGAATTCTACTTCACAATGATAGGAAGAGACA 41892 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 | || |||||||| |||||||| | |||||||| ||||| |||||||||||||||| Sbjct 41891 ATTTCAAAGGATCATAAAGCAACACTGTTATGAACGTTTGGCCACCACAAGCCAGTTATC 41832 Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234 | |||||||||| ||||| |||||| Sbjct 41831 CTTGTGGTAACTCTTCTGACACCTC 41807 >seq542 Length=2446208 Score = 84.2 bits (92), Expect = 4e-14 Identities = 77/96 (80%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||| ||||| | ||||| ||||||| | ||||| ||||||||||||| |||||| | Sbjct 1918359 CAGTGGGGTACAGCTAACTTGTCTCACGGCGGTCCAAACCCAGCTCACATTCCCT-GGGG 1918301 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||| |||||| |||||| || |||||||||||| Sbjct 1918300 GGGGGGAACAACCCAACGTTTGGTGAATTCTGCTTC 1918265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854277111648