Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acinonyx_20jubatus_20[refseq_20GCF_5F001443585.1_202015-11-13]
14,383 sequences; 2,372,553,907 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq622 298 2e-78
seq841 212 2e-52
seq844 210 7e-52
seq94 179 1e-42
seq970 172 2e-40
seq531 154 5e-35
seq1235 147 7e-33
seq1396 86.0 2e-14
seq222 75.2 4e-11
>seq622
Length=956070
Score = 298 bits (330), Expect = 2e-78
Identities = 204/230 (89%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | | ||||||||||||| ||||
Sbjct 399223 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTAGAGTCAAGGTCAA 399282
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| || |
Sbjct 399283 CAGGGTCTTCTTTCCCCCCTGATTCCACCAAGCCTGTTCCCCTGGCTGTGGTTTCACTGG 399342
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||| ||| |||||||||||||||||| ||| |||||||||||| |||||||||||| ||
Sbjct 399343 ATACTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGCATGTCACTAATTAGGTG 399402
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466
| |||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 399403 ATGAGGCATTTGGCTACCTTAAGAGAGTCATATTTACTCCCGAAATTTAC 399452
>seq841
Length=2535568
Score = 212 bits (234), Expect = 2e-52
Identities = 166/197 (84%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||| | | ||| || |||||||| ||||||||| ||| |||||||| |||||||||
Sbjct 174498 CTTGGCTATAGCTTCTCTGGATAGTAGGTAGGGACAGCGGGTATCTCGTTCATCCATTCA 174439
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
||| | |||||||||||| || ||||||||||||||||| | | ||| ||||||| |||
Sbjct 174438 TGCATGACACTAATTAGATAACAAGGCATTTGGCTACCTTGAAAAAGTAATAGTTATTCC 174379
Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516
| || |||| | || | | ||||||||||||||||||||||||||| ||||||||| ||
Sbjct 174378 CACCATTTA-CTGCACCTCATTGAATTTCTTCACTTTGACATTCAGAACACTGGGCAAAA 174320
Query 517 ATCACATTGCGTCAACA 533
|||||||| |||||||
Sbjct 174319 GTCACATTGTGTCAACA 174303
>seq844
Length=2097631
Score = 210 bits (232), Expect = 7e-52
Identities = 221/297 (74%), Gaps = 29/297 (10%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|| ||||||||| |||| ||||| |||| ||||| | | | |||||| |||||||||||
Sbjct 949416 CTTCCACTTATTTTACATCTCTCGTGTCACTTCACCATGCCAGACTAGGGTCAAGCTCAA 949475
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||| ||| || ||||| ||||| ||
Sbjct 949476 CAGGGTCTTCTTTCCCCA------------------TTCTCTATGCTGTAGTTTCTCTGA 949517
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||| ||||||||||| ||| || |||||| | | |||||||||| ||
Sbjct 949518 ATAGTAGGTAGGGATAGTGGGAATCTTGTTCATTCATTCACGTGGAGCACTAATTAGGTG 949577
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||| || || || | ||| | ||||
Sbjct 949578 GTGAGGCATTTGGCTACCTTAAGAGGGTTATTGT-----------TGTACTCAGGCTTCA 949626
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||
Sbjct 949627 CTGAATTTCTCCACTTTGACATTTGGAGTACTGGGCAGAAATCACATTGCATCAACA 949683
>seq94
Length=4638224
Score = 179 bits (198), Expect = 1e-42
Identities = 216/286 (76%), Gaps = 6/286 (2%)
Strand=Plus/Minus
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCAACA 298
||||||| | || | | | | |||| | ||| | ||| || || | ||| | |||
Sbjct 4431220 CCACTTAATGTATGCTTTTTATGTCACTACACCATGTCAGGTTTACAATCAGTTTTAACT 4431161
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
| ||||||||| || | |||| ||||||| |||||||||||||||||| | ||
Sbjct 4431160 GAGTCTTCTTTGACCTCAGATTTTTCCAAGCCA-TTCCCTTGGCTGTGGTTTTATCAAAT 4431102
Query 359 AGTAGATAGGGACAGTGGGAA-TCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
| ||| || |||||| | || | || || |||| ||||||| | || ||||||||||||
Sbjct 4431101 AATAGGTAAAGACAGTAGAAAATGTCATTCATCCGTTCATGCACATCTCTAATTAGATGA 4431042
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG-TTTACCCGCGCTTGG 476
|| ||| |||||||||||||||||||||||||||| ||| || |||| | ||||
Sbjct 4431041 CGGAGCACTTGGCTACCTTAAGAGAGTCATAGTTACACCCATCGATTTATATGGGCTTCA 4430982
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACT-GGGCAGAAATCAC 521
|||||||||||||||||||||||||| | || |||| |||||||
Sbjct 4430981 CTGAATTTCTTCACTTTGACATTCAGAACGCTAAGGCA-AAATCAC 4430937
>seq970
Length=546616
Score = 172 bits (190), Expect = 2e-40
Identities = 142/172 (83%), Gaps = 1/172 (1%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|||| | ||| |||||||||||| ||||| | |||||||| | || |||| || ||
Sbjct 507997 GACTGGGGTCCAGCTCAACAGGGCCTTCTACCTTCGCTGATTTCACCGGGCCCTTTTGCT 508056
Query 339 T-GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
| |||||||||||| || | |||||| ||||||||| |||||| || | ||||||||||
Sbjct 508057 TTGGCTGTGGTTTCACTGGGTAGTAGGTAGGGACAGGGGGAATGTCCCTCATCCATTCAT 508116
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449
| |||||||||||||||||| ||||| ||||||||| ||||||||||||||
Sbjct 508117 GAGCGTCACTAATTAGATGATGAGGCTTTTGGCTACTGTAAGAGAGTCATAG 508168
>seq531
Length=1164849
Score = 154 bits (170), Expect = 5e-35
Identities = 169/220 (77%), Gaps = 11/220 (5%)
Strand=Plus/Minus
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||||||| ||||||| ||||||| ||||| |||| || ||||||| ||| ||| |
Sbjct 193380 CTTTCCCTTCTGATTCTGCCAAGCTAGTTCC-TTGGTTGCA-TTTCGCTGAATACTAGGT 193323
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||| | | |||| |||| ||| || |||||| | ||| || ||| |||| |||| ||
Sbjct 193322 AGGAATATTGGGGATCTTGTTCCTCTATTCATAGACATCATTATTTACATGATGAGGTAT 193263
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCG----CCGTTTACCCGCGCTTGGTTGAA 481
||||||||| | |||| | ||| |||||||| || | ||| | ||| ||||
Sbjct 193262 TTGGCTACCCT--GAGAATTATACTTACTCCCTGATACCCT---CCCTCACTTCACTGAA 193208
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
||||||||||||||||||||||||||||||||||||||||
Sbjct 193207 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 193168
>seq1235
Length=812675
Score = 147 bits (162), Expect = 7e-33
Identities = 108/126 (86%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465
|| ||||||||| |||||| |||| ||||||||| | || ||||||||||| || ||||
Sbjct 584218 CTGATTAGATGATGAGGCAATTGGTTACCTTAAGCGCGTTGTAGTTACTCCCACCATTTA 584277
Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525
|| |||||| | |||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 584278 CCTGCGCTTCATCGAATTTCTTCGCTTTGACATTCAGAGCACTGGGCAGAAATCAGATCA 584337
Query 526 CGTCAA 531
||||||
Sbjct 584338 CGTCAA 584343
>seq1396
Length=431498
Score = 86.0 bits (94), Expect = 2e-14
Identities = 88/112 (79%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|||||||| |||| |||| ||||||||| ||| ||||||| | |||| | |||| |
Sbjct 110871 GACTAGAGGCAAGATCAATAGGGTCTTC----CCCACTGATTCATC-AAGCTCCTTCC-T 110924
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390
||||||||||||| || |||||||| | ||||||| |||| || || |||
Sbjct 110925 TGGCTGTGGTTTCACTGGATAGTAGGAACAGACAGTGAGAATTTCATTCATC 110976
>seq222
Length=8580851
Score = 75.2 bits (82), Expect = 4e-11
Identities = 62/76 (82%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
|||| ||||||||| || | || | || ||||||| | ||| |||||| |||||||||
Sbjct 4591693 CTTAGGAGAGTCATGGTAATTCTCACCATTTACCCACACTTCAATGAATTACTTCACTTT 4591752
Query 494 GACATTCAGAGCACTG 509
|||||||||||| |||
Sbjct 4591753 GACATTCAGAGCTCTG 4591768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634964809184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |