Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq33 93.3 2e-17 seq490 73.4 2e-11 >seq33 Length=3996623 Score = 93.3 bits (102), Expect = 2e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 47 GGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1377618 GGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGTGGCGCGGGAAATGTGGCGTA 1377673 >seq490 Length=1352423 Score = 73.4 bits (80), Expect = 2e-11 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||| ||| || |||||||||||||||| ||| | || |||||| |||| | Sbjct 857892 AGGATTCCCTCA-TAAAGGGGAGTGAACAGGGAAGATACCACCACCAAATCCCAGCCCTG 857834 Query 77 CGGTGGGGCGCGGGA 91 ||||||| | |||| Sbjct 857833 TGGTGGGGTGTGGGA 857819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230224031280