Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq1848 89.7 1e-15
>seq1848
Length=83282
Score = 89.7 bits (98), Expect = 1e-15
Identities = 203/303 (67%), Gaps = 8/303 (3%)
Strand=Plus/Minus
Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGT 72
||| |||||||||| | |||| | |||||||| ||| |||| | | || | |
Sbjct 50712 GGGAGTGAAATAGAACATGAAATTACTAGCCTACAAAGTGTCAGAGCACATTAATGTG-T 50654
Query 73 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGC 132
| ||||||| ||||| | ||||||| |||||| | | | || | ||||| |
Sbjct 50653 AATGGCGTGCGTTTTGAAGTATGAGCCGGAGAGTTATT-GCAAGTTGCAAAGTTAAACAC 50595
Query 133 TTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTA 192
| || ||| |||| ||||||||| ||||| |||||| |||| | || ||
Sbjct 50594 TAGTGG------AGCTGAAGCGAAAGCGAGTCTTAAAAGGGCGTTGAGTAAATTGCAATA 50541
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252
||| ||||| || ||| | | |||||||||||| | ||| |||||||
Sbjct 50540 GACCCGAAAGGGGACGAGCTAACTATGAGCAGGTTGAAATTTGAATAATATCAGATGGAG 50481
Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312
||| |||||| |||||||| | | ||||||||| | || ||| ||||||| |||
Sbjct 50480 GACTGAACCGACTGTCGTTGAAATGATAGCGGATGACTTGTGGTTAGAGGTGAAATTCCA 50421
Query 313 ATC 315
|||
Sbjct 50420 ATC 50418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972687262208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |