Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1848 89.7 1e-15 >seq1848 Length=83282 Score = 89.7 bits (98), Expect = 1e-15 Identities = 203/303 (67%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGT 72 ||| |||||||||| | |||| | |||||||| ||| |||| | | || | | Sbjct 50712 GGGAGTGAAATAGAACATGAAATTACTAGCCTACAAAGTGTCAGAGCACATTAATGTG-T 50654 Query 73 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGC 132 | ||||||| ||||| | ||||||| |||||| | | | || | ||||| | Sbjct 50653 AATGGCGTGCGTTTTGAAGTATGAGCCGGAGAGTTATT-GCAAGTTGCAAAGTTAAACAC 50595 Query 133 TTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTA 192 | || ||| |||| ||||||||| ||||| |||||| |||| | || || Sbjct 50594 TAGTGG------AGCTGAAGCGAAAGCGAGTCTTAAAAGGGCGTTGAGTAAATTGCAATA 50541 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||| ||||| || ||| | | |||||||||||| | ||| ||||||| Sbjct 50540 GACCCGAAAGGGGACGAGCTAACTATGAGCAGGTTGAAATTTGAATAATATCAGATGGAG 50481 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 ||| |||||| |||||||| | | ||||||||| | || ||| ||||||| ||| Sbjct 50480 GACTGAACCGACTGTCGTTGAAATGATAGCGGATGACTTGTGGTTAGAGGTGAAATTCCA 50421 Query 313 ATC 315 ||| Sbjct 50420 ATC 50418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972687262208