Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq9384 174 4e-41 seq2390 78.8 2e-12 >seq9384 Length=646 Score = 174 bits (192), Expect = 4e-41 Identities = 239/333 (72%), Gaps = 1/333 (0%) Strand=Plus/Minus Query 6 CTGAA-GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAA 64 ||||| ||||||| | |||||||| ||||||||||| ||||||| || |||| | | Sbjct 349 CTGAATGAATAAGTGACAGCTAACTATGTGCCAGCAGCTGCGGTAAAACATAGGTCACGA 290 Query 65 GCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGA 124 || ||| |||| ||| ||||||||||| ||| |||||| || | ||||| Sbjct 289 GCATTATCCGGATTTATTGGGCGTAAAGGAAGCGTAGGCGGACAGGTCGATCTATTGTGA 230 Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGG 184 || | | ||||||| | ||| | | | || | ||||| | || || | Sbjct 229 AAGGCACTTGCTTAACAAGTTGTTTGTGATAGAAATCGCCTGTCTAGAATTAGTTAGGAG 170 Query 185 GGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244 |||||||| | ||||||| ||| ||||||||||||| | ||||||||||| ||| Sbjct 169 ATACTGGAATTCAATGTGTAGCGGTGGAATGCGTAGATATATTGAGGAACACCAGAGGCT 110 Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 ||||| || ||| | | ||||||| | || |||||||||||||||||| ||| Sbjct 109 AAGGCGAGTATCTAGGACATAATTGACGCTGAGGCTTGAAAGCGTGGGGAGCAAATGGGA 50 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||| |||||||||||| |||||||| Sbjct 49 TTAGATACCCCAGTAGTCCACGCCGTAAACGAT 17 >seq2390 Length=15461 Score = 78.8 bits (86), Expect = 2e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 ||||||||| |||||||||||||||||||||| ||| | |||||||| || ||||| Sbjct 7843 CGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATATAAGCGTTATTCACAATTA 7902 Query 81 CTGGGCGTAAAGC 93 ||||| |||||| Sbjct 7903 TTGGGCATAAAGC 7915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289450548256