Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq6098 441 2e-121
seq1848 156 1e-35
seq2390 122 2e-25
>seq6098
Length=1150
Score = 441 bits (488), Expect = 2e-121
Identities = 274/294 (93%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||| |||||||||| |||| ||| ||||||||||||||| | ||||||||||
Sbjct 304 CGCGGGTACACCGCATCTTCACGGCGAATTCGATTTCACTGAGTCTCTGCTGGAGACAGC 245
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 GCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 185
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 184 TTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 125
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 124 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTT 65
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCT 294
|||||||||||||||||| ||||||||||||||||| |||| |||||||| |||
Sbjct 64 TCGTGTTTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCT 11
>seq1848
Length=83282
Score = 156 bits (172), Expect = 1e-35
Identities = 186/249 (75%), Gaps = 4/249 (2%)
Strand=Plus/Plus
Query 33 ATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGG 92
||||||| ||| || || ||||||| | | ||||| |||||| || || | |
Sbjct 49209 ATTTCACCGAGCCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAG 49268
Query 93 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152
|| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 49269 AATTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 49328
Query 153 CGGGGCTTCGATCAAGAGCTTC-GCGTT--AGC-TAACCCCATCAATTAACCTTCCGGCA 208
| |||||| | || |||| | || || || | ||| | | || |||||| ||||
Sbjct 49329 CAGGGCTTAAGTTAAAAGCTGCTGCCTTGCGGCTTGACCTCCTTCTTTGACCTTCTGGCA 49388
Query 209 CCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAA 268
||||||||| ||| | | ||||| || ||| |||||| | |||||||||||
Sbjct 49389 CCGGGCAGGTGTCGCCACATATACTTCATGTTTGAATTTTGCATATAGCTGTGTTTTTGT 49448
Query 269 TAAACAGTC 277
|||||||||
Sbjct 49449 TAAACAGTC 49457
>seq2390
Length=15461
Score = 122 bits (134), Expect = 2e-25
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||||| ||| |||||| ||| | | ||||||||| |||||| |
Sbjct 11017 ATCTTCACAGACATTATTATTTCATTGAAATTTTCTTTAAGACAGCGCTCAAATCGTTGC 10958
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
|| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 10957 TCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 10898
Query 135 GTTACGGCCGCCGTTTA 151
||| |||||||||||
Sbjct 10897 AATACAGCCGCCGTTTA 10881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260653885888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |