Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq6098 255 1e-65
seq1848 199 8e-49
seq2390 190 4e-46
>seq6098
Length=1150
Score = 255 bits (282), Expect = 1e-65
Identities = 236/298 (79%), Gaps = 1/298 (0%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | | ||||||| |||||| | | ||||||| ||||
Sbjct 298 TACACCGCATCTTCACGGCGAATTCGATTTCACTGAGTCTCTGCTGGAGACAGCGCCCCC 239
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 238 ATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 179
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
||||||| |||||||||||||||||||||||||| | | |||||| || | |||||
Sbjct 178 CCGTTATTGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTACGCTAAC 119
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| |||||||||||||||||||||||| ||| ||||||| || ||| || |
Sbjct 118 CCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTCGTGT 59
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
| ||||| || ||||||| |||||||| || |||||| | |||| || |||||
Sbjct 58 TTGCAGAGTGCTATGTTTTTAATAAACAGTTGCAGGGGCCTGGTTTCTGAGG-CTGTC 2
>seq1848
Length=83282
Score = 199 bits (220), Expect = 8e-49
Identities = 257/347 (74%), Gaps = 17/347 (5%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
||||||||||| ||| || |||||||| | | ||||| || ||| ||||| | |
Sbjct 49209 ATTTCACCGAGCCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAG 49268
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 49269 AATTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 49328
Query 147 TGGGGCTTAAGTTCA---CTGCTTCGATTGCTCTAACAGATCC--CCTTAACCTTCCAGC 201
||||||||||| | ||||| | |||| | ||| | || |||||| ||
Sbjct 49329 CAGGGCTTAAGTTAAAAGCTGCTGC-CTTGCGGCTTGACCTCCTTCTTTGACCTTCTGGC 49387
Query 202 ACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTG 261
|||||||||| ||| | | ||||| || | || | || ||| | | |||||||||||
Sbjct 49388 ACCGGGCAGGTGTCGCCACATATACTTCATGTTTGAATTTTGCATATAGCTGTGTTTTTG 49447
Query 262 GTAAACAGTCGCTTGGGCCT-ATTCT---CTGCGGCCTGTCA--TA-GACAGGCACCCCT 314
||||||||| | ||| ||||| ||| | || | | || | ||||| | |
Sbjct 49448 TTAAACAGTC----CGCCCTCATTCTTTACTGTGACCCGCGAGTTACCGCGGGCACTCTT 49503
Query 315 TCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTT 361
|||||||||||||| | || | ||||| |||||||||||| |||||
Sbjct 49504 TCTCCCTAAGTTACAGAGTTAATTTGCAGAGTTCCTTAACTGTAGTT 49550
>seq2390
Length=15461
Score = 190 bits (210), Expect = 4e-46
Identities = 252/346 (73%), Gaps = 13/346 (4%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||||||| | |||| |||||| || | | || |||||| || ||||||||| |
Sbjct 11017 ATCTTCACAGACATTATTATTTCATTGAAATTTTCTTTAAGACAGCGCTCAAATCGTTGC 10958
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 10957 TCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 10898
Query 129 GTTACGGCCGCCGTTT-ACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187
||| |||||||||| ||| | ||||| | | | || | ||| | |
Sbjct 10897 AATACAGCCGCCGTTTAACTAGAGCTTA--TAAAAATATATAATAG---TAATA-TTTTT 10844
Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247
||||| | | || || ||||||| ||||| || |||||||| | | | ||||||
Sbjct 10843 ATTAACTTACTAGAACTGGGCAGGAGTCAGTTCTTATACATCATAATTAAATTTAGCAAG 10784
Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307
|||||||||||||| |||||||||| ||| ||||| | | | | | | | | |
Sbjct 10783 AACCTGTGTTTTTGATAAACAGTCGTTTGAGCCTAGTATAT------TATACTTTAAAAG 10730
Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353
|| | || |||||||||||| | | |||||||| ||||||||||
Sbjct 10729 CATTCTTTGTCCCTAAGTTACAGAATAATTTTGCCTAGTTCCTTAA 10684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062276878464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |