Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq118 145 1e-32
seq890 89.7 8e-16
>seq118
Length=4196719
Score = 145 bits (160), Expect = 1e-32
Identities = 86/90 (96%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1232395 TTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 1232336
Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| ||||| |||||||||||||||||||||
Sbjct 1232335 ACGGAATCGAGAAAGAGCTATCAATCTGTC 1232306
>seq890
Length=552271
Score = 89.7 bits (98), Expect = 8e-16
Identities = 87/111 (78%), Gaps = 1/111 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCG-TTATCGGAATTAACCAGACAAATCACTCCACC 200
||| |||||| | || || | ||| |||| || ||||||||| ||||| ||||||||
Sbjct 305369 CTAGTTAGCATGCCAAAGTTTTGTTTTATTATAGGGATTAACCAGGCAAATTACTCCACC 305310
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
| ||||||| |||||||||||||| || ||||| ||||||||| |||
Sbjct 305309 GAGTAAGAACAGCCATGCACCACCATGCACAGAATTGGGAAAGAGCTTTCA 305259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796710544509
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |