Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq118 145 1e-32 seq890 89.7 8e-16 >seq118 Length=4196719 Score = 145 bits (160), Expect = 1e-32 Identities = 86/90 (96%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1232395 TTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 1232336 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| ||||||||||||||||||||| Sbjct 1232335 ACGGAATCGAGAAAGAGCTATCAATCTGTC 1232306 >seq890 Length=552271 Score = 89.7 bits (98), Expect = 8e-16 Identities = 87/111 (78%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCG-TTATCGGAATTAACCAGACAAATCACTCCACC 200 ||| |||||| | || || | ||| |||| || ||||||||| ||||| |||||||| Sbjct 305369 CTAGTTAGCATGCCAAAGTTTTGTTTTATTATAGGGATTAACCAGGCAAATTACTCCACC 305310 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | ||||||| |||||||||||||| || ||||| ||||||||| ||| Sbjct 305309 GAGTAAGAACAGCCATGCACCACCATGCACAGAATTGGGAAAGAGCTTTCA 305259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796710544509