Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq6098 223 7e-56
seq6520 168 1e-39
seq1848 163 6e-38
>seq6098
Length=1150
Score = 223 bits (246), Expect = 7e-56
Identities = 232/298 (78%), Gaps = 5/298 (2%)
Strand=Plus/Plus
Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC-CGGACGACGTATAA 102
||||||| ||| |||| |||| || ||||| ||||||| | | | ||| ||
Sbjct 412 GGAGCCGTCCTTGAAATACCACCCTGGTAATATTGAGGTTCTAACTCTGTCC-CGT-TAT 469
Query 103 CCGTTGACG-GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 161
||| |||| |||| |||| | ||| |||||||||||||||||| ||||| |||||||
Sbjct 470 CCGG-GACGAGGACCATGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGT 528
Query 162 AACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGC 221
|||||||| | | ||| | | |||||| ||| ||||| || ||| | ||| ||||||
Sbjct 529 AACGGAGGAGTACGAAGGTGCGCTCAGCGTGGTCGGAAATCACGCGTAGAGTATAAAGGC 588
Query 222 AAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281
||||| | | || ||||||| |||| |||||| |||||| |||||||| || |||| |||
Sbjct 589 AAAAGCGCGCTTAACTGCGAGACCCACAAGTCGAGCAGGTACGAAAGTAGGTCTTAGTGA 648
Query 282 TCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||| ||| ||| |||||| |||| |||||| ||||||||||| ||| |||||||||
Sbjct 649 TCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 706
>seq6520
Length=1017
Score = 168 bits (186), Expect = 1e-39
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||| || ||||||||||||||||||||| |||||| ||| ||||||||||||
Sbjct 39 GGACAGTGTTAGGTGGGCAGTTTGACTGGGGCGGTTGCCTCCTAAAATGTAACGGAGGCG 98
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231
| ||||| ||| || ||| | ||||||| | ||| | || | || | | | |||
Sbjct 99 CGCAAAGGTACACTTAGCACGTATGGAAATCGTGCAGAAAGGGTAATACTATATGTGTGC 158
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||| ||||| || |||||| | || | | |||| | || || |||||||| ||
Sbjct 159 TTGATTGCGAGACAGACAAGTCGAACAAGTAAGAAATTAGGCTATAGTGATCCGGTAGTT 218
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||||||| ||| |||||| ||||||||||||||| || ||||||
Sbjct 219 CTGAATGGAAGGGCTATCGCTCAACGGATAAAAGCTACTCTAGGGATA 266
>seq1848
Length=83282
Score = 163 bits (180), Expect = 6e-38
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||| || ||||||||||||||||||||| |||||| ||| |||||||||||||
Sbjct 49001 GGACAGTGTTAGGTGGGCAGTTTGACTGGGGCGGTTGCCTCCTAAAAAGTAACGGAGGCG 48942
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231
| ||||| ||| || ||| | ||||||| | || | || | || | | | |||
Sbjct 48941 CGCAAAGGTACACTTAGCGCGAATGGAAATCGCGCAAAAAGGGTAATACTATATGTGTGC 48882
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||| || || || |||||| | || | | |||| | || || |||||||| ||
Sbjct 48881 TTGATTGTGAGACAGACAAGTCGACCAAGTAAGAAATTAGGCTATAGTGATCCGGTAGTT 48822
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||||||| ||| |||||| ||||||||||||||| || ||||||
Sbjct 48821 CTGAATGGAAGGGCTATCGCTCAACGGATAAAAGCTACTCTAGGGATA 48774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982286149664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |