Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq6098 131 2e-28
seq1848 91.5 2e-16
seq2390 89.7 6e-16
>seq6098
Length=1150
Score = 131 bits (144), Expect = 2e-28
Identities = 134/181 (74%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| |||||||| | |||||||||| | | | | |||||||||
Sbjct 323 CGGGGTCTTTCCGTCTAGCCGCGGGTACACCGCATCTTCACGGCGAATTCGATTTCACTG 264
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || | | || |||||| || |||||||||||||||||||||||||
Sbjct 263 AG-TCTCTGCTGGAGACAGCGCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACC 205
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 204 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTT 145
Query 202 C 202
|
Sbjct 144 C 144
>seq1848
Length=83282
Score = 91.5 bits (100), Expect = 2e-16
Identities = 107/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||| | |||||||| |||| | | ||||||| || | ||||||| |||
Sbjct 49160 GGGTCTGTCCGTCCCATAGCGGCAAGAGAGTGTCTTCACTCTCACCAGGATTTCACCGAG 49219
Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
| || || ||||||| |||||||||| || || | ||| ||||| ||
Sbjct 49220 CCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAGAATTTACCTGA 49279
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||
Sbjct 49280 CAAGGAATTTCGCTACCTTAGGACCGTTA 49308
>seq2390
Length=15461
Score = 89.7 bits (98), Expect = 6e-16
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 10956 CCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTA 10900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547138566711
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |