Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1848 179 1e-42 >seq1848 Length=83282 Score = 179 bits (198), Expect = 1e-42 Identities = 322/464 (69%), Gaps = 30/464 (6%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||| | |||||||||||| | | | |||||| ||| Sbjct 50369 GACGCTAGTCCTAAAACTATATCGACAAAAACCAGCTATCAGGGAACTCGATTGGAATTT 50428 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| ||| ||||| ||||||| || ||||||| ||| ||||| |||||||| Sbjct 50429 CACCTCTAACCACAAGTCATCCGCTATCATTTCAACGACAGTCGGTTCAGTCCTCCATCT 50488 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313 | | ||| | |||||||||| ||| | ||| || | ||||||||| || | Sbjct 50489 GATATTATTCAAATTTCAACCTGCTCATAGTTAGCTCGTCCCCTTTCGGGTCT--AT--T 50544 Query 314 GC----CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC-ACGGGTT 368 || ||||| ||||||| || |||||||||||||| | ||| |||| | | || Sbjct 50545 GCAATTTACTCA-ACGCCCTTTTAAGACTCGCTTTCGCTTCAGCT---CCACTAGTGTTT 50600 Query 369 AACCTCGCGAC--ACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426 ||| | || || ||| ||||| | ||||||| |||||||| ||||||| | || Sbjct 50601 AACTTTGCAACTTGCAA---TAACTCTCCGGCTCATACTTCAAAACGCACGCCATTAC-- 50655 Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTT 486 || | || | |||| ||| |||||||| | ||||| || |||||| Sbjct 50656 ---ACATTAA-------TGTGCTCTGACACTTTGTAGGCTAGTAATTTCATGTTCTATTT 50705 Query 487 CACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCAC 546 ||||||| |||| ||||||| |||||| |||| |||||||| | |||||||| | Sbjct 50706 CACTCCCATATCTGGGTTCTTTTCATCTTTCCTTCACAGTACTTGTTCACTATCGGTAAA 50765 Query 547 CAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 | |||||||||||||| | | |||||| | | |||||| || Sbjct 50766 TGATTAGTATTTAGGCTTACCCGATGGTCCGGGCGGATTCAGAC 50809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817389358336