Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq1848 179 1e-42
>seq1848
Length=83282
Score = 179 bits (198), Expect = 1e-42
Identities = 322/464 (69%), Gaps = 30/464 (6%)
Strand=Plus/Plus
Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193
|||||| |||||| || ||| | |||||||||||| | | | |||||| |||
Sbjct 50369 GACGCTAGTCCTAAAACTATATCGACAAAAACCAGCTATCAGGGAACTCGATTGGAATTT 50428
Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253
|||| ||| ||||| ||||||| || ||||||| ||| ||||| ||||||||
Sbjct 50429 CACCTCTAACCACAAGTCATCCGCTATCATTTCAACGACAGTCGGTTCAGTCCTCCATCT 50488
Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313
| | ||| | |||||||||| ||| | ||| || | ||||||||| || |
Sbjct 50489 GATATTATTCAAATTTCAACCTGCTCATAGTTAGCTCGTCCCCTTTCGGGTCT--AT--T 50544
Query 314 GC----CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC-ACGGGTT 368
|| ||||| ||||||| || |||||||||||||| | ||| |||| | | ||
Sbjct 50545 GCAATTTACTCA-ACGCCCTTTTAAGACTCGCTTTCGCTTCAGCT---CCACTAGTGTTT 50600
Query 369 AACCTCGCGAC--ACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||| | || || ||| ||||| | ||||||| |||||||| ||||||| | ||
Sbjct 50601 AACTTTGCAACTTGCAA---TAACTCTCCGGCTCATACTTCAAAACGCACGCCATTAC-- 50655
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTT 486
|| | || | |||| ||| |||||||| | ||||| || ||||||
Sbjct 50656 ---ACATTAA-------TGTGCTCTGACACTTTGTAGGCTAGTAATTTCATGTTCTATTT 50705
Query 487 CACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCAC 546
||||||| |||| ||||||| |||||| |||| |||||||| | |||||||| |
Sbjct 50706 CACTCCCATATCTGGGTTCTTTTCATCTTTCCTTCACAGTACTTGTTCACTATCGGTAAA 50765
Query 547 CAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
| |||||||||||||| | | |||||| | | |||||| ||
Sbjct 50766 TGATTAGTATTTAGGCTTACCCGATGGTCCGGGCGGATTCAGAC 50809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817389358336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |