Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1848 190 5e-46 >seq1848 Length=83282 Score = 190 bits (210), Expect = 5e-46 Identities = 282/386 (73%), Gaps = 13/386 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| |||||| | ||| ||||| ||||||||| |||||||| | || || Sbjct 50438 CCACAAGTCAT-CCGCTATCATTT-CAACGACAGTCGGTTCAGTCCTCCATCTGATA-TT 50494 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 | ||| ||||||||||| ||||| ||| ||| || ||| |||||||||| | | Sbjct 50495 ATTCAAA-TTTCAACCTGCTCATAGT-TAGCTCGTCCCCTTT-CGGGTCTATTGCA-ATT 50550 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188 ||| ||||||| ||||||||||||| |||| | |||| ||| | ||| | ||||| Sbjct 50551 TACTCAACGCCCTTTTAAGACTCGCTTT-CGCTTCAGCTCCACTAGT--GTTTAACTTTG 50607 Query 189 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG 248 | ||| ||||| || | | | ||| | ||||| | |||| | || || || ||| Sbjct 50608 CAACTTGCAATAACTCTCCGGCTCATACTTCAAAACGCACGCCATTACACATTAATGTGC 50667 Query 249 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 308 || |||| ||||| || ||||| | |||||||||||||| | || ||| ||| Sbjct 50668 TCTGACACT--TTGTAGGCTAGTAATTTCATGTTCTATTTCACTCCCATATCTGGG-TTC 50724 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 ||||| |||||| |||| ||||| ||||||||||||| | | | |||||||||| ||| Sbjct 50725 TTTTCATCTTTCCTTCACAGTACTTGTTCACTATCGGTAAATGATTAGTATTTAGGCTTA 50784 Query 369 GAGGATGGTCCCCCCATATTCAGACA 394 |||||||| | ||||||||| Sbjct 50785 CCCGATGGTCCGGGCGGATTCAGACA 50810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241456110976