Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq9384 168 1e-39
>seq9384
Length=646
Score = 168 bits (186), Expect = 1e-39
Identities = 211/285 (74%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59
||||||||||| |||||||||||| ||| ||||| || | |||||| ||| ||||||
Sbjct 62 CCCACGCTTTCAAGCCTCAGCGTCAATTA-TGTCCTAGATACTCGCCTTAGCCTCTGGTG 120
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC--GATTGCCTCTCCAG 117
|||||| |||||||||||||| |||||||||||| ||||||| || ||| | |
Sbjct 121 TTCCTCAATATATCTACGCATTCCACCGCTACACATTGAATTCCAGTATCTCCTAACTA- 179
Query 118 CACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTG 177
| || ||| | | |||| | || | | ||| ||| | ||||||| |
Sbjct 180 -ATTCTAGACAGGCGATTTCTATCACAAACAACTTGTTAAGCAAGTGCCTTTCACAATAG 238
Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237
| ||| |||||||| | ||||||| |||||||||||||||||| ||| | ||||
Sbjct 239 ATCGACCTGTCCGCCTACGCTTCCTTTACGCCCAATAAATCCGGATAATGCTCGTGACCT 298
Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
| || ||||||| ||||||||||| |||||||| || |||||||
Sbjct 299 ATGTTTTACCGCAGCTGCTGGCACATAGTTAGCTGTCACTTATTC 343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828706951919
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |