Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq6098 136 3e-30 seq6520 105 5e-21 seq1848 96.9 2e-18 >seq6098 Length=1150 Score = 136 bits (150), Expect = 3e-30 Identities = 115/141 (82%), Gaps = 8/141 (6%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 695 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 636 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | |||| | ||||||| | |||| | |||||||| || ||| Sbjct 635 CTTTCGTACCTGCTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACT-- 578 Query 121 CACTACG----ATTTCCGACC 137 ||||| |||||||||| Sbjct 577 --CTACGCGTGATTTCCGACC 559 >seq6520 Length=1017 Score = 105 bits (116), Expect = 5e-21 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||||||||||| ||||||||||||| | | ||||||||||||| ||| Sbjct 255 TAGCTTTTATCCGTTGAGCGATAGCCCTTCCATTCAGAACTACCGGATCACTATAGCCTA 196 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | || || | |||| |||||||||||||||||| | | ||| | || | Sbjct 195 ATTTCTTACTTGTTCGACTTGTCTGTCTCGCAATCAAGCACACATATAGTATTACCCTTT 136 Query 121 CACTACGATTTCC 133 | ||||||||| Sbjct 135 CTGCACGATTTCC 123 >seq1848 Length=83282 Score = 96.9 bits (106), Expect = 2e-18 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||||||||||| ||||||||||||| | | ||||||||||||| ||| Sbjct 48785 TAGCTTTTATCCGTTGAGCGATAGCCCTTCCATTCAGAACTACCGGATCACTATAGCCTA 48844 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACAC 103 |||| | || || | |||| |||| ||||||||||||| Sbjct 48845 ATTTCTTACTTGGTCGACTTGTCTGTCTCACAATCAAGCACAC 48887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351961756300