Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq9384 178 4e-42 >seq9384 Length=646 Score = 178 bits (196), Expect = 4e-42 Identities = 244/346 (71%), Gaps = 25/346 (7%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||| ||||| ||| |||||| | ||| ||||| | |||||||| Sbjct 593 ATTAGGTAGTTGGCGGGGTAAAGGCCCACCAAGCCAGTGATGGGTAGCTGGACTGAGAGG 534 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||| | ||| || ||| | ||||| | || ||| | |||||||||| ||||||||| || Sbjct 533 TTGAACAGCCGCAATGGGATTGAGAGATGGCCCATATTCCTACGGGAAGCAGCAGTGAGG 474 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || |||||||| | |||| |||||| ||||| || ||||| ||||||||| |||| Sbjct 473 AATTTTTCACAATGGACGAAAGTCTGATGGAGCAATACCACGTGAACGATGAAGGTCTTC 414 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGATAA------------------------TGAC 383 | | |||||| ||| | | ||||| | || ||| Sbjct 413 TGATTGTAAAGTTCTTTTATTCAGGAAAAAAAGCTTGATAGGAAATGATTAAGCCTTGAT 354 Query 384 GGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 ||||| | || ||| | |||||||| ||||||||||| ||||||| || |||| Sbjct 353 CGTACTGAATGAATAAGTGACAGCTAACTATGTGCCAGCAGCTGCGGTAAAACATAGGTC 294 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 | ||| ||||||||| ||| | ||||||||||| ||||||| || Sbjct 293 ACGAGCATTATCCGGATTTA-TTGGGCGTAAAGGAAGCGTAGGCGG 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497426443136