Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq9384 214 4e-53 >seq9384 Length=646 Score = 214 bits (236), Expect = 4e-53 Identities = 245/327 (75%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 21 GCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACT 80 |||||||| ||||||||||| ||||||| || |||| | ||| ||||||||| ||| | Sbjct 331 GCTAACTATGTGCCAGCAGCTGCGGTAAAACATAGGTCACGAGCATTATCCGGATTTATT 272 Query 81 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCC 140 ||||||||||| ||||||| || | || ||||||||| | ||| ||| Sbjct 271 GGGCGTAAAGGAAGCGTAGGCGGACAGGTCGATCTATTGTGAAAGGCACTTGCTTAACAA 212 Query 141 CGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTG 200 | || | |||| || | ||||| | ||| | | |||||||| ||| Sbjct 211 GTTGTTTGTGATAGAAATCGCCTGTCTAGAATTAGTTAGGAGATACTGGAATTCAATGTG 152 Query 201 TAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT-GGAC 259 |||||||| ||||||||||||| |||||||||||| ||| |||||| | || |||| Sbjct 151 TAGCGGTGGAATGCGTAGATATATTGAGGAACACCAGAGGCTAAGGCGAGTATCTAGGAC 92 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 ||| |||| |||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct 91 A-TAATTGACGCTGAGGCTTGAAAGCGTGGGGAGCAAATGGGATTAGATACCCCAGTAGT 33 Query 320 CCACGCCGTAAACGATGAATACTAGGT 346 ||||||||||||||||| || ||||| Sbjct 32 CCACGCCGTAAACGATGGGTATTAGGT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203060561152