Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1848 118 4e-24 >seq1848 Length=83282 Score = 118 bits (130), Expect = 4e-24 Identities = 269/396 (68%), Gaps = 13/396 (3%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||| | ||||| ||| ||||||| ||| |||||| ||||| ||| ||||||| Sbjct 50485 TGGAGGACTGAACCGACTGTCGTTGAAATGATAGCGGATGACTTGTGGTTAGAGGTGAAA 50426 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209 | || | | | |||||||||| | ||| | |||||| || ||| | Sbjct 50425 TTCCAATCGAGTTCCCTGATAGCTGGTTTTTGTCGATATAGTTTTAGGACTAGCGTCAGG 50366 Query 210 TA---TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAA 266 | | || || |||| |||||| || || ||| | |||| ||||||| Sbjct 50365 CAAAATAACAGGTGGAGGTAAAGCACTAA-ATCTATAAGGGCATCTCGCGATGTACCAAA 50307 Query 267 CC--ATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTA 324 ||| |||||| |||| | |||| || || | || |||||| || | | || Sbjct 50306 TAGAATT--AAACTCTGAATTC-CATCTGTCGTATCCTGGCAGTGAGACTATTTGGGATA 50250 Query 325 AGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT 384 || | | || |||| |||| || ||| | || ||||| ||| |||| | |||| Sbjct 50249 AGCTTTATAGTCGTGAGGGAAAGAGCCCAGACCAACAAATAAGGTCCCTAAATTA-AGCT 50191 Query 385 AAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 |||| || || |||||| | | | | ||| ||||||||||||||| |||||||||| Sbjct 50190 AAGTGGAA--AAGGAAGTCAAAATTCATAAACAACTAGGATGTTGGCTTAGAAGCAGCCA 50133 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | |||||||||||||||||| |||||||||||| || Sbjct 50132 T-CATTTAAAGAGTGCGTAATAGCTCACTAGTCTAG 50098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689404192256