Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq9384 165 2e-38 >seq9384 Length=646 Score = 165 bits (182), Expect = 2e-38 Identities = 217/298 (73%), Gaps = 6/298 (2%) Strand=Plus/Plus Query 2 GCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAG-CTCCCACACGT 60 ||||||||||| ||||||| | ||||||||| |||| |||| || || | Sbjct 312 GCTGCTGGCACATAGTTAGCTGTCACTTATTCATTCAGTACGATCAAGGCTTAATCATTT 371 Query 61 GG----AAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTC 116 ||| |||| |||| ||||||||| ||||||||| | ||| |||||||| ||| Sbjct 372 CCTATCAAGCTTTTTTTCCTGAATAAAAGAACTTTACAATCAGAAGA-CCTTCATCGTTC 430 Query 117 ACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCC 176 ||| | ||| ||||||| |||||||||| || ||||||||||||||| |||| Sbjct 431 ACGTGGTATTGCTCCATCAGACTTTCGTCCATTGTGAAAAATTCCTCACTGCTGCTTCCC 490 Query 177 GTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTAT 236 |||||| | ||| || | ||||| | ||| || || | | |||||||| | ||| Sbjct 491 GTAGGAATATGGGCCATCTCTCAATCCCATTGCGGCTGTTCAACCTCTCAGTCCAGCTAC 550 Query 237 CCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCAT 294 ||||| |||| |||||||| |||||||||| |||||||||| | || || ||||| Sbjct 551 CCATCACTGGCTTGGTGGGCCTTTACCCCGCCAACTACCTAATAGGACATATTCCCAT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068676136768