Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq6208 120 5e-25
seq5172 109 9e-22
>seq6208
Length=1111
Score = 120 bits (132), Expect = 5e-25
Identities = 99/118 (84%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | ||| ||| || || |||||| |||| || |||| || ||||
Sbjct 87 GTACGAGAGGAACAGTGGA-TTCGGA-TACTTGGTTAATGCGCTTGGCTGATAAGCCAGT 144
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118
| ||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct 145 GGCGCGAAGCTACCATCCGTTGGATAATGACTGAACGCCTCTAAGTCAGAATCCATGC 202
>seq5172
Length=1569
Score = 109 bits (120), Expect = 9e-22
Identities = 94/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | ||||||| || || |
Sbjct 30 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGTCTGAGGAGCCAAT 87
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 88 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819108029696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |