Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq86 111 1e-19
seq64 95.1 1e-14
seq54 82.4 6e-11
>seq86
Length=5199016
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || |||| ||||| ||
Sbjct 130212 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 130271
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 130272 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 130331
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 130332 AGACTCAATGATGGCATACCAAAG 130355
>seq64
Length=5459255
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 1606177 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 1606236
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 1606237 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 1606283
>seq54
Length=5886867
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347
|| || || |||||||| |||||||| ||||||||||| || |||| || |||||||||
Sbjct 1577480 GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCATTCAGAGATGTAC 1577421
Query 61348 AGTGTTCTCATCGATACGTACAT 61370
||| | ||||| || || |||||
Sbjct 1577420 AGTCTCCTCATTGACACTTACAT 1577398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397511847122960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |