Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq150 95.1 5e-14
seq846 86.0 3e-11
seq180 86.0 3e-11
>seq150
Length=4781790
Score = 95.1 bits (104), Expect = 5e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143
||||||||| | ||||| |||||||||||||||||||| | || |||||| |||| ||
Sbjct 2549972 CTCCTTGAGGCGGGGCACACCCAGGGTCACGTTCTTGGCAGACACACCGGCATAGTGAAA 2550031
Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203
||| | | ||||| ||| ||| ||||| || | | |||| | || ||| ||| ||
Sbjct 2550032 GGTGTTCAAGGTCATCTGGGTGGCAGGCTCTCCAAGGGACTGTGCGGCCAGGGCGCCCAC 2550091
Query 349204 CATCTCGCCGGG 349215
|||||| || ||
Sbjct 2550092 CATCTCCCCAGG 2550103
>seq846
Length=633994
Score = 86.0 bits (94), Expect = 3e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131
||||| || ||||| |||| | ||||| |||||||| | |||| ||| || |||||
Sbjct 208114 GGCGTTGATGATCTCTTTGATCCGGGGCACACCCAGGGTGATGTTCATGGAGGCCACGCC 208173
Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186
||||||||||| |||| ||||||| ||| ||| ||||| || |||| ||||
Sbjct 208174 CGCAAAGTGGAAAGTCTTCAGGGTCATCTGGGTGCCTGGCTCACCAATGCTCTGG 208228
>seq180
Length=6490584
Score = 86.0 bits (94), Expect = 3e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 349094 CTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGG 349153
|| || ||||||||||| |||||| | | | |||||||||||||||||| | |||
Sbjct 1300512 CTCGGGATGCCCAGGGTGACGTTCATCTCGCCTCTGCCGGCAAAGTGGAAGGTGTTCAGG 1300453
Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213
|||| ||||||| |||||| ||||||| ||| | || || | ||| || ||||||
Sbjct 1300452 GTCATCTGCGTGGAGGGCTCCCCGATGCTCTGCGCAGCAAGCAGGCCCACGGCCTCGCCC 1300393
Query 349214 GG 349215
||
Sbjct 1300392 GG 1300391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084422099441022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |