Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq4234 161 1e-37 seq4374 140 3e-31 >seq4234 Length=168850 Score = 161 bits (178), Expect = 1e-37 Identities = 156/199 (78%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| ||||| ||||||||||||||||| |||||||||||| ||||||| | ||| Sbjct 87220 GCACTCTTTGAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTTGGGGGCCGGAC 87279 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 | |||||| | ||||| | ||||||| || | || | | ||| |||||||||||| Sbjct 87280 TGCGTTAGTCTAACTTAGCATACATTTCGGGACCTTAGCCGGTGGTCTGGATTCTTCTCC 87339 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||||||||||||||| ||||| ||||| |||| | | | | ||| ||||||||| Sbjct 87340 TCTCGGGCACGGACCTTAGCACCCGCGCCCTTACTC-CAGGACTTAACTCTTGCGCATTC 87398 Query 181 GGAGTTTGGCAGGACTTGA 199 |||||||| | |||||||| Sbjct 87399 GGAGTTTGTCTGGACTTGA 87417 >seq4374 Length=59948 Score = 140 bits (154), Expect = 3e-31 Identities = 151/199 (76%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| ||||| ||||||||||||||||| |||||||| ||| ||||| || || |||| Sbjct 1019 GCACTCTTTGAATGAATGGCTGCTTCCAAGCCAACATGCTAGCTGTCATAGGAAAGAGAC 1078 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||||||| | ||| | ||| | ||| ||| | || | ||| |||||||||||| Sbjct 1079 TTCGTTAGCCTAACTCAGCTGCGACTTCGGGGCCTTAGACGGTGGTCTGGATTCTTCTCC 1138 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 ||||||| |||||| ||| ||||| |||| ||| | ||| || | |||||| Sbjct 1139 TCTCGGGAACGGACGTTAGCACCCGCCCCCTTTCTC-CATGGCTTGGCGCTCAGGCATTC 1197 Query 181 GGAGTTTGGCAGGACTTGA 199 ||||||||||||||||||| Sbjct 1198 GGAGTTTGGCAGGACTTGA 1216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537573444408