Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01000026.1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
seq4234 161 1e-37
seq4374 140 3e-31
>seq4234
Length=168850
Score = 161 bits (178), Expect = 1e-37
Identities = 156/199 (78%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| ||||| ||||||||||||||||| |||||||||||| ||||||| | |||
Sbjct 87220 GCACTCTTTGAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTTGGGGGCCGGAC 87279
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
| |||||| | ||||| | ||||||| || | || | | ||| ||||||||||||
Sbjct 87280 TGCGTTAGTCTAACTTAGCATACATTTCGGGACCTTAGCCGGTGGTCTGGATTCTTCTCC 87339
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||||||||||||||| ||||| ||||| |||| | | | | ||| |||||||||
Sbjct 87340 TCTCGGGCACGGACCTTAGCACCCGCGCCCTTACTC-CAGGACTTAACTCTTGCGCATTC 87398
Query 181 GGAGTTTGGCAGGACTTGA 199
|||||||| | ||||||||
Sbjct 87399 GGAGTTTGTCTGGACTTGA 87417
>seq4374
Length=59948
Score = 140 bits (154), Expect = 3e-31
Identities = 151/199 (76%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| ||||| ||||||||||||||||| |||||||| ||| ||||| || || ||||
Sbjct 1019 GCACTCTTTGAATGAATGGCTGCTTCCAAGCCAACATGCTAGCTGTCATAGGAAAGAGAC 1078
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
|||||||| | ||| | ||| | ||| ||| | || | ||| ||||||||||||
Sbjct 1079 TTCGTTAGCCTAACTCAGCTGCGACTTCGGGGCCTTAGACGGTGGTCTGGATTCTTCTCC 1138
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
||||||| |||||| ||| ||||| |||| ||| | ||| || | ||||||
Sbjct 1139 TCTCGGGAACGGACGTTAGCACCCGCCCCCTTTCTC-CATGGCTTGGCGCTCAGGCATTC 1197
Query 181 GGAGTTTGGCAGGACTTGA 199
|||||||||||||||||||
Sbjct 1198 GGAGTTTGGCAGGACTTGA 1216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537573444408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |