Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq4660 246 8e-63
seq4910 237 4e-60
seq4374 226 7e-57
>seq4660
Length=54038
Score = 246 bits (272), Expect = 8e-63
Identities = 304/410 (74%), Gaps = 8/410 (2%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
||| | | ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||
Sbjct 4032 TACATCACGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGC 3973
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT-TGTGTAAGACAGGTG 121
|||||||| |||| ||| |||| ||||| ||||| |||| || ||| ||| ||| |
Sbjct 3972 AAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCTGTCTGT-CAAGTCAGAGG 3914
Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181
|||||| || | || |||| |||| ||| |||| |||| | || || | | |
Sbjct 3913 TGAAATACCTGAGCCTAACTCAGGAACTGCCTTTGATACTGGCAGGCTGGAATACGGATG 3854
Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241
| ||| ||||| ||||||| ||||||||| ||||||| ||||||| ||
Sbjct 3853 CCGTGGGAGGAATGAGTAGTGTAGCGGTGAAATGCATAGATATTACTCAGAACACCGATT 3794
Query 242 GCGAAGGCAGCCCCCTGGGAT--AACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299
||||||||| | | | | || || ||||||| | ||||||||||||||||| ||||
Sbjct 3793 GCGAAGGCATCTCAC--GAATCCGTCATTGACGCTGAGGCACGAAAGCGTGGGGATCAAA 3736
Query 300 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTT 359
|||||||||||||||||||||||||||| |||||||| ||||| || || || |
Sbjct 3735 CAGGATTAGATACCCTGGTAGTCCACGCAGTAAACGATGATAACTAACCGTCGGCGA--T 3678
Query 360 ACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| | ||| | ||| || ||| ||||| || |||||||| |||
Sbjct 3677 ACACAGTCGGTGGCCAAGCGAAAGCGATAAGTTATCCACCTGGGGAGTAC 3628
>seq4910
Length=11294
Score = 237 bits (262), Expect = 4e-60
Identities = 250/328 (76%), Gaps = 1/328 (0%)
Strand=Plus/Minus
Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69
|||| ||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 1732 AGAACAAGCACCGGCTAATTACGTGCCAGCAGCCGCGGTAACACGTAAGGTGCGAGCGTT 1673
Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129
||||||||| ||||||||||| | | ||||||| ||||| | || ||||||||
Sbjct 1672 GTTCGGAATTATTGGGCGTAAAGGGCATGTAGGCGGTCCGGTAAGTCGGGCGTGAAATCG 1613
Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189
| |||| |||| | || | ||||| | || |||| | || || ||
Sbjct 1612 CGGGGCCCAACCCCGCGCG-GCGCCCGATACTGCTGGTCTTGAGTCAGCGAGGCGGAGGC 1554
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||||| |||||| ||||||| |||||||| ||| ||||||| ||||||||||
Sbjct 1553 GGAATTCCTGGTGTAGGGGTGAAATCTGTAGATATCAGGAAGAACACCGGTGGCGAAGGC 1494
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
|||| || | | ||||||||| | | |||| | | ||||||||||||||||||||
Sbjct 1493 AGCCTCCGAGCGCATGACTGACGCTGAGGTGCGAAGGTGCGGGGAGCAAACAGGATTAGA 1434
Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337
|||||||||||||| | | ||||||||
Sbjct 1433 TACCCTGGTAGTCCGCACAGTAAACGAT 1406
>seq4374
Length=59948
Score = 226 bits (250), Expect = 7e-57
Identities = 247/327 (76%), Gaps = 1/327 (0%)
Strand=Plus/Minus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
||||||| ||||||||| | |||||||||||||||||||||||| | ||| | ||||||
Sbjct 3736 GAATAAGGACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA 3677
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
|||| ||| |||| ||||| | |||||||||| ||| ||| ||||||| |
Sbjct 3676 TCCGGATTTATTGGGTTTAAAGGGAGCGCAGGCGGGAAGTCAAGTCAGCCGTGAAATGTC 3617
Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190
| |||| |||| || || || ||| |||| || | ||| ||||| || |
Sbjct 3616 CCGGCTCAACCGGGTCAT-GCGGTTGAAACTGTCTTTCTTGGGTGCACAAGAGGCAGGCG 3558
Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250
||| || ||||||| ||||||||| ||||||| || |||| || || |||||||||
Sbjct 3557 GAACTCGTGGTGTAGCGGTGAAATGCATAGATATCACGATGAACCCCGATTGCGAAGGCA 3498
Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310
||| | ||| | || ||||||||||| |||| ||| ||| | |||||||||||||||
Sbjct 3497 GCCTGCCGGGGTGTTACCGACGCTCATGCTCGAAGGCGCGGGTATCAAACAGGATTAGAT 3438
Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337
||||||||||||| ||| ||||||||
Sbjct 3437 ACCCTGGTAGTCCGCGCGGTAAACGAT 3411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289534243296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |