Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq2436 347 3e-93
seq4234 327 2e-87
seq4374 318 1e-84
seq4660 298 1e-78
>seq2436
Length=67316
Score = 347 bits (384), Expect = 3e-93
Identities = 288/349 (83%), Gaps = 2/349 (1%)
Strand=Plus/Minus
Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
|||||||||||||| | ||||||||||||||| || | |||||||||||||| ||||
Sbjct 2026 CGGCATCTTCACCGCCACTACAATTTCACCGAGCTCATGGCTGAGACAGTGCCCAGATCG 1967
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1966 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1907
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184
||||||||||||||||||||| ||||||| |||| ||||| |||| || |
Sbjct 1906 TATAGTTACGGCCGCCGTTTAACGGGGCTTCGATTCAGACCTTCGCTTGCGCTGAGCCCC 1847
Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT-GCGACTTAG 243
|| ||||||||||| ||||||||||| ||||| | ||| || |||| ||| ||||
Sbjct 1846 CCTCTTAACCTTCCGTCACCGGGCAGGTGTCAGGCCACATATCTCATCTTAACGATTTAG 1787
Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGA 303
| | | |||||||||||||||||||||| |||||| ||||||||| |||| | ||
Sbjct 1786 CGTAGCCATGTGTTTTTGGTAAACAGTCGCCTGGGCCATTTCTCTGCGCCCTGCCGAAG- 1728
Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||| ||||||||||| |||||||||||| | |||||| |||||||||
Sbjct 1727 CAGGGTCCCCTTCTCCCGAAGTTACGGGGTAAATTTGCCTAGTTCCTTA 1679
>seq4234
Length=168850
Score = 327 bits (362), Expect = 2e-87
Identities = 291/359 (81%), Gaps = 15/359 (4%)
Strand=Plus/Plus
Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
|||||||||||||| | ||||||||||| | | | |||||||||||| || |||
Sbjct 86296 CGGCATCTTCACCGATACTACAATTTCACTGGGCTCACGGTTGAGACAGTGTCCGGATCA 86355
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 86356 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 86415
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAA-CAGA 183
|||||||||||||||||||||| ||||||| | |||| |||| ||| |||| || |
Sbjct 86416 TATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGACCTTC---TGC-CTAAGCATA 86471
Query 184 -----TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
||| ||||||||||| |||||||||||| ||||| ||||| |||||| |||
Sbjct 86472 AGCCCTCCTCTTAACCTTCCGGCACCGGGCAGGTGTCAGACTGTATACCGCGTCTTTCGA 86531
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC---CT 295
||| ||| | |||||||||||| |||||||| || ||| ||||||||||||| | ||
Sbjct 86532 CTTCGCACAGCCCTGTGTTTTTGTTAAACAGTTGCCTGGACCTATTCTCTGCGCCTCGCT 86591
Query 296 GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354
|||| || | |||| || |||| ||||||| ||||||||||||| | |||||||||
Sbjct 86592 TTCAT--ACGAGGACCCTTTATCCCGAAGTTACAGGGTCATTTTGCCTAATTCCTTAAC 86648
>seq4374
Length=59948
Score = 318 bits (352), Expect = 1e-84
Identities = 287/355 (81%), Gaps = 7/355 (2%)
Strand=Plus/Plus
Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
||||||| |||||| | ||||||||||||| | |||||||||||| || |||
Sbjct 92 CGGCATCATCACCGATACTACAATTTCACCGGGCTCGCGGTTGAGACAGTGTCCGGATCA 151
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 211
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TCTAACAG 182
|||||||||||||||||||||| ||||||| | |||| ||||| |||| || | |
Sbjct 212 TATAGTTACGGCCGCCGTTTACCGGGGCTTCAACTCACACCTTCGCCTTGCGGCTGAGCG 271
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
||| ||||||||||| |||||||||||| ||||| ||||| | | ||| |||
Sbjct 272 CTCCTCTTAACCTTCCGGCACCGGGCAGGTGTCAGGCTGTATACGTGGCCTTCATGCTTT 331
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302
||| | ||||||||||||||||||||| || ||| || |||||||| |||| || |
Sbjct 332 GCACAGCCCTGTGTTTTTGGTAAACAGTTGCCTGGACCGTTTCTCTGC-GCCTCACAAAC 390
Query 303 ACAG---GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354
| || | |||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct 391 A-AGTGAGGACCCCTTCTCCCGAAGTTACGGGGTCAGTTTGCCTAGTTCCTTAAC 444
>seq4660
Length=54038
Score = 298 bits (330), Expect = 1e-78
Identities = 281/352 (80%), Gaps = 6/352 (2%)
Strand=Plus/Plus
Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
|||||||||||||| | ||||||||||||||| | | ||||||||| ||| ||||
Sbjct 695 CGGCATCTTCACCGCCACTACAATTTCACCGAGCTCACGGCTGAGACAGTATCCAGATCG 754
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
|||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 814
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC-GATTGC-TCTAACAG 182
||||||||||||||||||||| ||||||| |||| |||| | |||| ||||
Sbjct 815 TATAGTTACGGCCGCCGTTTAACGGGGCTTCGATTCAGACCTTCGGCTTGCGCCTAAGCC 874
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT-GCGACTT 241
|| ||||||||||| ||||||||||| ||||| | || || |||| ||| ||
Sbjct 875 CCCCTCTTAACCTTCCGTCACCGGGCAGGTGTCAGGCCACATGTGTCATCTTAACGATTT 934
Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-TGTCAT 300
||| | | |||||||||||||||||||||| ||| | ||||||||| || |||
Sbjct 935 AGCGTAGCCATGTGTTTTTGGTAAACAGTCGCCTGGATCATTTCTCTGCGCCCACCTCAC 994
Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
| || ||||||||||| |||||||||||||| |||||| |||||||||
Sbjct 995 GG--TGGGTCCCCTTCTCCCGAAGTTACGGGGTCAATTTGCCTAGTTCCTTA 1044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062345828224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |