Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4910 336 7e-90 seq4660 329 1e-87 seq4374 293 7e-77 >seq4910 Length=11294 Score = 336 bits (372), Expect = 7e-90 Identities = 374/495 (76%), Gaps = 7/495 (1%) Strand=Plus/Minus Query 6 CCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGT 65 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1333 CCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGT 1274 Query 66 TTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCC-TCTAGA 124 ||||||||| | |||||| |||||||||| ||||||| | | | | || Sbjct 1273 TTAATTCGATGGTACGCGAGGAACCTTACCTGGGTTTGACATACAGGGGGATGGTTTGGA 1214 Query 125 GATAGAGGTTTCCCCTT-CGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTC 183 || || | ||| | || | || ||||||| ||||||| |||||||||||| Sbjct 1213 GACAGGCCAGCCGGCTTGCCGGCCCCTGA---ACAGGTGCTGCATGGCTGTCGTCAGCTC 1157 Query 184 GTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCAT 243 ||| |||||| |||||||||||||||||||||||||||||||| || |||| ||| Sbjct 1156 GTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTACTGCCAGTTACCAG 1097 Query 244 C--ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACG 301 | | ||| ||| ||||| |||||| ||||| ||||||||| ||||| | Sbjct 1096 CGGGTAAAGCCGGGGACTCTGGCGGAACTGCCCCCGACAAGGGGGAGGAAGGCGGGGATG 1037 Query 302 ACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACA 361 ||||||| |||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 1036 ACGTCAAGTCATCATGGCCCTTATGTCCAGGGCTACACACGTGCTACAATGGCGGGGACA 977 Query 362 AAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGT 421 || | |||| |||||||| |||| | | | ||| | ||||||||| | Sbjct 976 GAGCGGGGCGAGGCCGCGAGGCGGAGCAGAGCGCGGAAATCCCGCCGTAGTTCGGATCGG 917 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481 |||||| ||| ||||| |||||||||||||||||||||||| ||||||| | || Sbjct 916 AGTCTGAAACCCGACTCCGTGAAGCTGGAATCGCTAGTAATCGCGCATCAGCACGGCGCG 857 Query 482 GTGAATACGTTCCCG 496 ||||||||||||||| Sbjct 856 GTGAATACGTTCCCG 842 >seq4660 Length=54038 Score = 329 bits (364), Expect = 1e-87 Identities = 382/502 (76%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||| ||| ||| Sbjct 3630 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACAT 3571 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCCC- 118 |||||||||||||| | |||||| |||||||||| || || || ||| Sbjct 3570 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTCGAACGGCTGGTGAAGAGA 3511 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAG-AGTGACAGGTGATGCATGGTTGTCGT 177 || |||||| | | |||| ||||||| ||| ||| ||||| |||||||||||||| Sbjct 3510 TCCAGAGATGGTGACGTCCC-TTCGGGG-ACACCAGTCG-AGGTGCTGCATGGTTGTCGT 3454 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||||| | |||| || |||||||||||||||| | ||| Sbjct 3453 CAGCTCGTGTCGTGAGATGTTGGCTCAAGTGCCATAACGAGCGCAACCCTTGCTGTCAGT 3394 Query 238 TGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTG 295 | ||| ||| ||| | |||| ||||| | ||||||| | | |||||||| | Sbjct 3393 TACCAGCATGTAATGATGGGGACTCTGACAGGACTGCCACCGTAAGGTGTGAGGAAGGCG 3334 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| |||||||||||| || | |||||| | |||| ||||||||| |||||||| Sbjct 3333 GGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCGACACACGTGTTACAATGGTG 3274 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 | |||| |||| || | |||| ||| |||| | |||| | |||||||||| Sbjct 3273 ACTACAGAGGGATGCCACCTGGCGACAGGGAGCGAATCTCGAAAAG-TCATCTCAGTTCG 3215 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CA 474 ||| | |||||||||| ||||| |||||||||| ||||||||||||| ||||| || Sbjct 3214 GATCGAAGTCTGCAACCCGACTTCGTGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCA 3155 Query 475 TGCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 3154 TGGCGCGGTGAATACGTTCCCG 3133 >seq4374 Length=59948 Score = 293 bits (324), Expect = 7e-77 Identities = 375/504 (74%), Gaps = 17/504 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| | |||| | |||||||||||||||||||||||| ||||||||||||| ||| ||| Sbjct 3341 TACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACAT 3282 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT-CTGACCCCT 119 |||||||||||||| | |||||| |||||||||| ||||| || || ||| | Sbjct 3281 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAATGCTACTG---GCG 3225 Query 120 CTAGAGATAGAGGTTTCC--CCTTCGGGGGACAG-AGTGACAGGTGATGCATGGTTGTCG 176 |||| ||| | || |||||||| ||| |||| ||||| ||||||||||||| Sbjct 3224 GGGGAGAGAGACCTCCCCCTCCTTCGGG---CAGTAGTG-TAGGTGCTGCATGGTTGTCG 3169 Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236 |||||||||| |||||| ||| || | |||| || |||||||||||||| | | || Sbjct 3168 TCAGCTCGTGCCGTGAGGTGTCGGCTCAAGTGCCATAACGAGCGCAACCCCTGTCCCCAG 3109 Query 237 TTGCCATC--ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGG 293 ||||| || | || ||||||||| | ||||||| | ||| || |||||||| Sbjct 3108 TTGCCGTCGGGTAGAGCCGGGCACTCTGTGGATACTGCCGCCG-CAAGGCGTGAGGAAGG 3050 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| |||||||||||| || | |||||| | |||| ||||||||| |||||||| Sbjct 3049 TGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCCACACACGTGTTACAATGG 2990 Query 354 ACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 ||| | || | | | |||| | | ||| || |||| || ||||| Sbjct 2989 GGGGCACAGCGAGCTGGGTCATGGCGACATGTCCCGAAT-CCTTAAATCCCCTCCCAGTT 2931 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG- 472 |||| | |||||||||| ||||| ||||||||| ||||||||||||| ||||| Sbjct 2930 CGGACAGGAGTCTGCAACCCGACTCCTCGAAGCTGGATTCGCTAGTAATCGCGCATCAGC 2871 Query 473 CATGCTACGGTGAATACGTTCCCG 496 |||| ||||||||||||||||| Sbjct 2870 CATGGCGCGGTGAATACGTTCCCG 2847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503923311040