Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4234 78.8 2e-12 seq2436 73.4 7e-11 >seq4234 Length=168850 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 85741 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 85800 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 85801 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCAC 85857 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | | |||| |||||||| | ||| ||||| Sbjct 85858 TCCGTCGATATGAGCTCTTGGGAGGGATCAGCCTGTTATCCCCGGAGTACCTTTT 85912 >seq2436 Length=67316 Score = 73.4 bits (80), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| | || ||||| | ||| Sbjct 2579 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATCGGCGAACAGCCGAACC 2520 Query 113 CTTACCGAATTCTGCTTCGGT---ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| ||||| | | | ||| || ||||||||||||| | |||| || Sbjct 2519 CTTG--GAAC-CTGCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCGC 2463 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||| | ||||| || | |||| |||||||| | ||| ||||| Sbjct 2462 TCCGTCGATTTGAGCTCTTGGGAGCGATCAGCCTGTTATCCCCGGAGTACCTTTT 2408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854356434144