Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq4234 78.8 2e-12
seq2436 73.4 7e-11
>seq4234
Length=168850
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||
Sbjct 85741 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 85800
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| |||| | | | ||| || ||||||||||||| | |||| |
Sbjct 85801 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCAC 85857
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||| | ||||| | | |||| |||||||| | ||| |||||
Sbjct 85858 TCCGTCGATATGAGCTCTTGGGAGGGATCAGCCTGTTATCCCCGGAGTACCTTTT 85912
>seq2436
Length=67316
Score = 73.4 bits (80), Expect = 7e-11
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| | || ||||| | |||
Sbjct 2579 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATCGGCGAACAGCCGAACC 2520
Query 113 CTTACCGAATTCTGCTTCGGT---ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| ||||| | | | ||| || ||||||||||||| | |||| ||
Sbjct 2519 CTTG--GAAC-CTGCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCGC 2463
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| | ||| | ||||| || | |||| |||||||| | ||| |||||
Sbjct 2462 TCCGTCGATTTGAGCTCTTGGGAGCGATCAGCCTGTTATCCCCGGAGTACCTTTT 2408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854356434144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |