Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq4660 174 3e-41 seq2436 165 2e-38 seq4234 156 8e-36 >seq4660 Length=54038 Score = 174 bits (192), Expect = 3e-41 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| || ||| | | || Sbjct 507 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTCCCAAGGTCCGCT 448 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| |||||| || | ||| | |||||| |||| ||| | | ||||||| || || Sbjct 447 CAGCGCGGATGGCAATCGCGCGAAGAGTGCAGTGGCATAAGCGGGCTTGACTGGGAGACA 388 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| |||||| |||||||| |||| | |||||||| ||| | ||||| | ||| Sbjct 387 AACAAGTCGAGCAGGTACGAAAGTAGGGCAAAGTGATCCGGTGGTTCCCAATGGGAGGGC 328 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||| ||| | ||||||| Sbjct 327 CATCGCTCATAGGATAAAAGGTACTCCGGGGATA 294 >seq2436 Length=67316 Score = 165 bits (182), Expect = 2e-38 Identities = 165/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||| ||||||||||| || ||| | | || Sbjct 2213 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGCGTAACGGAGGCTTCCCAAGGTCCGCT 2272 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| |||||| || | ||| | |||||| |||| ||| | | ||||||| || || Sbjct 2273 CAGCGCGGATGGCAATCGCGCGTAGAGTGCAGTGGCATAAGCGGGCTTGACTGAGAGACT 2332 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 | |||||| | |||| |||||||| |||| | |||||||| ||| | |||| | ||| Sbjct 2333 CACAAGTCGATCAGGTACGAAAGTAGGGCAAAGTGATCCGGTGGTTCCTCATGGGAGGGC 2392 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||| ||| | ||||||| Sbjct 2393 CATCGCTCATAGGATAAAAGGTACTCCGGGGATA 2426 >seq4234 Length=168850 Score = 156 bits (172), Expect = 8e-36 Identities = 165/215 (77%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||| ||||||||||| || |||| |||||| Sbjct 86107 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGCGTAACGGAGGCTCCTAAAGGTACCCT 86048 Query 186 CAGCTTGGATGGAAACCATGCG-CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 || | ||| |||| ||| || |||| || |||||||||||| ||||||| || | Sbjct 86047 CACGCCGATTGGTAACCG-GCGTCAGAGTGTAATGGCAAAAGGGTGCTTGACTGGGAGGC 85989 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 || | | |||| |||| | || || |||||||||||| | | |||||| || Sbjct 85988 AGACATGCCGCACAGGTGGGAAACCAGAGCATAGTGATCCGGCGGTTCCGTATGGAAGGG 85929 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||||||| | ||||||||| ||| | ||||||| Sbjct 85928 CCGTCGCTCAAAGGATAAAAGGTACTCCGGGGATA 85894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982349907424