Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq4234 224 1e-56
seq4374 212 7e-53
seq4660 194 2e-47
seq2436 188 8e-46
>seq4234
Length=168850
Score = 224 bits (248), Expect = 1e-56
Identities = 138/151 (91%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 86267 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 86326
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 86327 GGCTCACGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCC 86386
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 86387 GACAAGGAATTTCGCTACCTTAGGACCGTTA 86417
>seq4374
Length=59948
Score = 212 bits (234), Expect = 7e-53
Identities = 135/151 (89%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 63 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCATCACCGATACTACAATTTCACCG 122
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 123 GGCTCGCGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCC 182
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 183 GACAAGGAATTTCGCTACCTTAGGACCGTTA 213
>seq4660
Length=54038
Score = 194 bits (214), Expect = 2e-47
Identities = 131/151 (87%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |
Sbjct 666 CGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCG 725
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 726 AGCTCACGGCTGAGACAGTATCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 785
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 786 GACAAGGAATTTCGCTACCTTAGGACCGTTA 816
>seq2436
Length=67316
Score = 188 bits (208), Expect = 8e-46
Identities = 130/151 (86%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |
Sbjct 2055 CGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCG 1996
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 1995 AGCTCATGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 1936
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 1935 GACAAGGAATTTCGCTACCTTAGGACCGTTA 1905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547172970201
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |