Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq4234 224 1e-56 seq4374 212 7e-53 seq4660 194 2e-47 seq2436 188 8e-46 >seq4234 Length=168850 Score = 224 bits (248), Expect = 1e-56 Identities = 138/151 (91%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86267 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 86326 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 86327 GGCTCACGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCC 86386 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 86387 GACAAGGAATTTCGCTACCTTAGGACCGTTA 86417 >seq4374 Length=59948 Score = 212 bits (234), Expect = 7e-53 Identities = 135/151 (89%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 63 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCATCACCGATACTACAATTTCACCG 122 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 123 GGCTCGCGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCC 182 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 183 GACAAGGAATTTCGCTACCTTAGGACCGTTA 213 >seq4660 Length=54038 Score = 194 bits (214), Expect = 2e-47 Identities = 131/151 (87%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||| | Sbjct 666 CGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCG 725 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 726 AGCTCACGGCTGAGACAGTATCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 785 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 786 GACAAGGAATTTCGCTACCTTAGGACCGTTA 816 >seq2436 Length=67316 Score = 188 bits (208), Expect = 8e-46 Identities = 130/151 (86%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||| | Sbjct 2055 CGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACCG 1996 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 1995 AGCTCATGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 1936 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 1935 GACAAGGAATTTCGCTACCTTAGGACCGTTA 1905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547172970201