Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq4241 100 1e-18
seq240 87.8 7e-15
>seq4241
Length=93636
Score = 100 bits (110), Expect = 1e-18
Identities = 263/392 (67%), Gaps = 16/392 (4%)
Strand=Plus/Minus
Query 166 GTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACAC 225
||||||||| | ||||| | | | |||| |||| | ||| | |||| || || ||
Sbjct 73618 GTAGTTGCCTGCGAACATGGTGACTTTGCCGAAGTCGATGTCGACGGTGTGCGTGCATAC 73559
Query 226 GCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAG---GCTGGAACGCTGGGT 282
|| || ||||||||||||||||| || || || | ||| | | ||| || | |
Sbjct 73558 GCAGTCGAGGAAGTGACGGTCGTGGCTGACGACGAGGA-CAGTGTGTTCGAA--CTCGCT 73502
Query 283 CAGGATATT-TTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGA 341
|| |||||| ||||| ||| ||| ||| | || ||| | || |||||| || |||||||
Sbjct 73501 CA-GATATTGTTCCAACCACTGGACGGTATCGAGGTCGAGGTCGTTGGTAGGCTCGTCGA 73443
Query 342 GCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGC--TTCCA 399
||| ||| || |||| | || || |||| ||||||| || |||| | ||||
Sbjct 73442 GCAGCAGGTTATCTGGATTGCCGAAGAGTGCCTTTGCCAGCATGACGCGCACCTTTTCCT 73383
Query 400 GCCCGGGGACACTTCGCTCATCGGACCGAAGTGC--TGCTCCAGCGGAATACCCAGACCC 457
|| || | |||| ||| | | ||||| |||| | || || || ||
Sbjct 73382 TACC--CGAGAGCTCGCCCATGAGCTGGTAGTGCTTTGCTTC--TTTTATGCCGAGGCCG 73327
Query 458 AGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTT 517
||||| || |||| | || || |||||| ||||||||||||||| |
Sbjct 73326 GAGAGCAGTGCAGCGGCGTCGCTCTCAGCCTCGTAGCCACCCATCTCGGCGAACTTCTCT 73267
Query 518 TCCAGCTCGGCCACGGCCATGCCGTCTTCTTC 549
||||||||||| ||| ||||||||||| ||
Sbjct 73266 TCCAGCTCGGCGACGCGTATGCCGTCTTCGTC 73235
>seq240
Length=9876
Score = 87.8 bits (96), Expect = 7e-15
Identities = 130/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 166 GTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACAC 225
||||||||| | ||||| || | | | |||||| | ||| | |||| ||| || ||
Sbjct 1610 GTAGTTGCCAGAGAACATACGGATTTTGTTGTAGTCGATGTCGACGATGTCGGTGCAGAC 1669
Query 226 GCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCT--GGAACGCTGGGTC 283
| ||| |||||||| ||||||||||||| || ||| | | | | || | | ||| |
Sbjct 1670 GTTGTCGAGGAAGTGTCGGTCGTGAGAGACGACGATGA-CGGTATTGGGGAAGTTGG--C 1726
Query 284 AGGATATT-TTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAG 342
| |||| ||| |||||| ||| |||| || ||| | || |||||| |||||||||||
Sbjct 1727 GAGGTATTCTTCGAGCCAGAGGACTGTGTCGAGGTCGAGGTCGTTGGTGGGTTCGTCGAG 1786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1881501059004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |