Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq4910 111 1e-22 seq4660 105 6e-21 >seq4910 Length=11294 Score = 111 bits (122), Expect = 1e-22 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||| ||| |||||| | ||||| |||||| |||| | | | ||||| ||||||| Sbjct 903 TCGGGTTTCAGACTCCGATCCGAACTACGGCGGGATTTCCGCGCTCTGCTCCGCCTCGCG 962 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || | |||||| |||||||| ||||||| |||||| ||||||||||| Sbjct 963 GCCTCGCCCCGCTCTGTCCCCGCCATTGTAGCACGTGTGTAGCCCTGGACATAAGGGCCA 1022 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159 ||| ||||||||||||||||| ||||||||| ||||| Sbjct 1023 TGATGACTTGACGTCATCCCCGCCTTCCTCCCCCTTGTC 1061 >seq4660 Length=54038 Score = 105 bits (116), Expect = 6e-21 Identities = 114/150 (76%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||| |||||||||| | ||||| ||| ||| ||||| | |||| |||||| |||| Sbjct 3195 TCGGGTTGCAGACTTCGATCCGAACTGAGATG-ACTTTTCGAGATTCGCTCCCTGTCGCC 3253 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | |||| ||||||||| ||||||||| ||||||| |||| | |||||||| Sbjct 3254 AGGTGGCATCCCTCTGTAGTCACCATTGTAACACGTGTGTCGCCCCGGACGTAAGGGCCG 3313 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 || || |||||||||||||| |||||||| Sbjct 3314 TGCTGATTTGACGTCATCCCCGCCTTCCTC 3343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415979451030