Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq4910 111 1e-22
seq4660 105 6e-21
>seq4910
Length=11294
Score = 111 bits (122), Expect = 1e-22
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
||| ||| |||||| | ||||| |||||| |||| | | | ||||| |||||||
Sbjct 903 TCGGGTTTCAGACTCCGATCCGAACTACGGCGGGATTTCCGCGCTCTGCTCCGCCTCGCG 962
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || | |||||| |||||||| ||||||| |||||| |||||||||||
Sbjct 963 GCCTCGCCCCGCTCTGTCCCCGCCATTGTAGCACGTGTGTAGCCCTGGACATAAGGGCCA 1022
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTC 159
||| ||||||||||||||||| ||||||||| |||||
Sbjct 1023 TGATGACTTGACGTCATCCCCGCCTTCCTCCCCCTTGTC 1061
>seq4660
Length=54038
Score = 105 bits (116), Expect = 6e-21
Identities = 114/150 (76%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
||| |||||||||| | ||||| ||| ||| ||||| | |||| |||||| ||||
Sbjct 3195 TCGGGTTGCAGACTTCGATCCGAACTGAGATG-ACTTTTCGAGATTCGCTCCCTGTCGCC 3253
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| |||| ||||||||| ||||||||| ||||||| |||| | ||||||||
Sbjct 3254 AGGTGGCATCCCTCTGTAGTCACCATTGTAACACGTGTGTCGCCCCGGACGTAAGGGCCG 3313
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150
|| || |||||||||||||| ||||||||
Sbjct 3314 TGCTGATTTGACGTCATCCCCGCCTTCCTC 3343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415979451030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |