Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq4374 208 1e-51
seq4910 181 2e-43
seq4660 179 6e-43
>seq4374
Length=59948
Score = 208 bits (230), Expect = 1e-51
Identities = 216/282 (77%), Gaps = 1/282 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||| ||| |||| || | |||||| || || || ||| | |||||||| | || ||
Sbjct 3456 CCCGCGCCTTCGAGCATGAGCGTCGGTAACACCCCGGCAGGCTGCCTTCGCAATCGGGGT 3515
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| || ||||||| ||||||||||||||||| || ||||| ||||||| ||||
Sbjct 3516 TCATCGTGATATCTATGCATTTCACCGCTACACCACGAGTTCCGCCTGCCTCTTGTGCAC 3575
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
||||||| |||||||||| ||| | || ||||||| | |||||| ||||||
Sbjct 3576 CCAAGAAAGACAGTTTCAACCGCATGACCCGG-TTGAGCCGGGACATTTCACGGCTGACT 3634
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
|| |||||||||| | | ||||||| |||||||||||||||||||||| | | | ||
Sbjct 3635 TGACTTCCCGCCTGCGCTCCCTTTAAACCCAATAAATCCGGATAACGCCCGGACCTTCCG 3694
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| | ||||||| |||||||
Sbjct 3695 TATTACCGCGGCTGCTGGCACGGAATTAGCCGGTCCTTATTC 3736
>seq4910
Length=11294
Score = 181 bits (200), Expect = 2e-43
Identities = 210/282 (74%), Gaps = 1/282 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||| | | ||||| ||||||||||||| | | | | | ||||||||||| |||||
Sbjct 1451 CCCGCACCTTCGCACCTCAGCGTCAGTCATGCGCTCGGAGGCTGCCTTCGCCACCGGTGT 1510
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| ||| |||||||| |||||||| |||||| ||||||||| | | ||| ||
Sbjct 1511 TCTTCCTGATATCTACAGATTTCACCCCTACACCAGGAATTCCGCCTCCGCCTCGCTGAC 1570
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|||||| | |||| || || | | |||||| |||| | |||||| | ||||
Sbjct 1571 TCAAGACCAGCAGTATCGGGCGCCG-CGCGGGGTTGGGCCCCGCGATTTCACGCCCGACT 1629
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| || ||||||||| ||||||||| |||||||| |||| | |||||| || | ||||
Sbjct 1630 TACCGGACCGCCTACATGCCCTTTACGCCCAATAATTCCGAACAACGCTCGCACCTTACG 1689
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
| |||||||||||||||||||||| ||||||| |||| |||
Sbjct 1690 TGTTACCGCGGCTGCTGGCACGTAATTAGCCGGTGCTTGTTC 1731
>seq4660
Length=54038
Score = 179 bits (198), Expect = 6e-43
Identities = 221/296 (75%), Gaps = 12/296 (4%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTG--TCCAGCAATCCGCCTTCGCCACTGGT 58
|||||||||||| |||||||||||| | || | || | || |||||||| | |||
Sbjct 3743 CCCACGCTTTCGTGCCTCAGCGTCAATGACGGATTCGTGAGAT--GCCTTCGCAATCGGT 3800
Query 59 GTTCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAG 117
|||| | ||| |||||| ||||||||||||||||| ||||| | || | ||
Sbjct 3801 GTTC-TGAGTAATATCTATGCATTTCACCGCTACACTACTCATTCC---TCCCACGGCAT 3856
Query 118 C---ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACAT 174
| | || || |||| ||||| |||| || ||| || || |||||| |
Sbjct 3857 CCGTATTCCAGCCTGCCAGTATCAAAGGCAGTTCCTGAGTTAGGCTCAGGTATTTCACCT 3916
Query 175 CTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCA 234
|||||||| | | |||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 3917 CTGACTTGACAGACAGCCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGCAT 3976
Query 235 CCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| |||||||||||||||||||||||| ||||||||| |||||||| | | |||
Sbjct 3977 CCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCGTGATGTA 4032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828759060129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |