Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq4660 114 9e-24 seq4234 100 2e-19 seq2436 100 2e-19 >seq4660 Length=54038 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||| ||||| | ||||||||||||| || ||| Sbjct 305 TACCTTTTATCCTATGAGCGATGGCCCTCCCATTGGGAACCACCGGATCACTTTGCCCTA 364 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | |||||| | ||||| |||| || |||||| | ||| ||||| |||||| Sbjct 365 CTTTCGTACCTGCTCGACTTGTTTGTCTCCCAGTCAAGCCCGCTTATGCCACTGCACT 422 >seq4234 Length=168850 Score = 100 bits (110), Expect = 2e-19 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||| ||||||||||| | | || ||||||||||||| ||| Sbjct 85905 TACCTTTTATCCTTTGAGCGACGGCCCTTCCATACGGAACCGCCGGATCACTATGCTCTG 85964 Query 61 CTTTCGCATCTGCTCTAGTTGT-TGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| || ||| | ||| ||| ||| || |||||||| ||||||||||| |||| Sbjct 85965 GTTTCCCACCTGTGCGGCATGTCTGC-CTCCCAGTCAAGCACCCTTTTGCCATTACACT 86022 >seq2436 Length=67316 Score = 100 bits (110), Expect = 2e-19 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||| |||| | ||||||||||||| || ||| Sbjct 2415 TACCTTTTATCCTATGAGCGATGGCCCTCCCATGAGGAACCACCGGATCACTTTGCCCTA 2356 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | |||| |||| || |||||| | ||| ||||| |||||| Sbjct 2355 CTTTCGTACCTGATCGACTTGTGAGTCTCTCAGTCAAGCCCGCTTATGCCACTGCACT 2298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351983173300