Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq4660 114 9e-24
seq4234 100 2e-19
seq2436 100 2e-19
>seq4660
Length=54038
Score = 114 bits (126), Expect = 9e-24
Identities = 96/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||| ||||| | ||||||||||||| || |||
Sbjct 305 TACCTTTTATCCTATGAGCGATGGCCCTCCCATTGGGAACCACCGGATCACTTTGCCCTA 364
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| | |||||| | ||||| |||| || |||||| | ||| ||||| ||||||
Sbjct 365 CTTTCGTACCTGCTCGACTTGTTTGTCTCCCAGTCAAGCCCGCTTATGCCACTGCACT 422
>seq4234
Length=168850
Score = 100 bits (110), Expect = 2e-19
Identities = 95/119 (80%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||| ||||||||||| | | || ||||||||||||| |||
Sbjct 85905 TACCTTTTATCCTTTGAGCGACGGCCCTTCCATACGGAACCGCCGGATCACTATGCTCTG 85964
Query 61 CTTTCGCATCTGCTCTAGTTGT-TGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||| || ||| | ||| ||| ||| || |||||||| ||||||||||| ||||
Sbjct 85965 GTTTCCCACCTGTGCGGCATGTCTGC-CTCCCAGTCAAGCACCCTTTTGCCATTACACT 86022
>seq2436
Length=67316
Score = 100 bits (110), Expect = 2e-19
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||| |||| | ||||||||||||| || |||
Sbjct 2415 TACCTTTTATCCTATGAGCGATGGCCCTCCCATGAGGAACCACCGGATCACTTTGCCCTA 2356
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| | ||| || | |||| |||| || |||||| | ||| ||||| ||||||
Sbjct 2355 CTTTCGTACCTGATCGACTTGTGAGTCTCTCAGTCAAGCCCGCTTATGCCACTGCACT 2298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351983173300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |