Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq4660 125 7e-27
seq2436 120 3e-25
seq4234 86.0 6e-15
>seq4660
Length=54038
Score = 125 bits (138), Expect = 7e-27
Identities = 120/154 (78%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85
|||||||||||||| ||||| |||||||||||||||| || ||| |||||| |||||||
Sbjct 319 TGAGCGATGGCCCTCCCATTGGGAACCACCGGATCACTTTGCCCTACTTTCGTACCTGCT 378
Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145
||| || |||| |||||||||| |||||||||| |||||| | | |||| ||
Sbjct 379 CGACTTGTTTGTCTCCCAGTCAAGCCCGCTTATGCCACTGCACTCTTCGCGCGATTGCCA 438
Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||| | | ||| |||||| | |||||||||
Sbjct 439 TCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTA 472
>seq2436
Length=67316
Score = 120 bits (132), Expect = 3e-25
Identities = 119/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85
|||||||||||||| |||| |||||||||||||||| || ||| |||||| ||||| |
Sbjct 2401 TGAGCGATGGCCCTCCCATGAGGAACCACCGGATCACTTTGCCCTACTTTCGTACCTGAT 2342
Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145
||| || | |||| |||||||||| |||||||||| |||||| | | |||| ||
Sbjct 2341 CGACTTGTGAGTCTCTCAGTCAAGCCCGCTTATGCCACTGCACTCTACGCGCGATTGCCA 2282
Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||| | | ||| |||||| | |||||||||
Sbjct 2281 TCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTA 2248
>seq4234
Length=168850
Score = 86.0 bits (94), Expect = 6e-15
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
|||||||| ||||||||||| | ||||| ||||||||||||| ||| |||| ||||||
Sbjct 85918 TTGAGCGACGGCCCTTCCATACGGAACCGCCGGATCACTATGCTCTGGTTTCCCACCTGT 85977
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
|| ||| ||| ||||||||| ||| ||||||| ||||
Sbjct 85978 GCGGCATGTCTGCCTCCCAGTCAAGCACCCTTTTGCCATTACACT 86022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473576605788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |