Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq4660 125 7e-27 seq2436 120 3e-25 seq4234 86.0 6e-15 >seq4660 Length=54038 Score = 125 bits (138), Expect = 7e-27 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 |||||||||||||| ||||| |||||||||||||||| || ||| |||||| ||||||| Sbjct 319 TGAGCGATGGCCCTCCCATTGGGAACCACCGGATCACTTTGCCCTACTTTCGTACCTGCT 378 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||| || |||| |||||||||| |||||||||| |||||| | | |||| || Sbjct 379 CGACTTGTTTGTCTCCCAGTCAAGCCCGCTTATGCCACTGCACTCTTCGCGCGATTGCCA 438 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| | | ||| |||||| | ||||||||| Sbjct 439 TCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTA 472 >seq2436 Length=67316 Score = 120 bits (132), Expect = 3e-25 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 |||||||||||||| |||| |||||||||||||||| || ||| |||||| ||||| | Sbjct 2401 TGAGCGATGGCCCTCCCATGAGGAACCACCGGATCACTTTGCCCTACTTTCGTACCTGAT 2342 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||| || | |||| |||||||||| |||||||||| |||||| | | |||| || Sbjct 2341 CGACTTGTGAGTCTCTCAGTCAAGCCCGCTTATGCCACTGCACTCTACGCGCGATTGCCA 2282 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| | | ||| |||||| | ||||||||| Sbjct 2281 TCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTA 2248 >seq4234 Length=168850 Score = 86.0 bits (94), Expect = 6e-15 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||| ||||||||||| | ||||| ||||||||||||| ||| |||| |||||| Sbjct 85918 TTGAGCGACGGCCCTTCCATACGGAACCGCCGGATCACTATGCTCTGGTTTCCCACCTGT 85977 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 || ||| ||| ||||||||| ||| ||||||| |||| Sbjct 85978 GCGGCATGTCTGCCTCCCAGTCAAGCACCCTTTTGCCATTACACT 86022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473576605788