Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq4660 291 2e-76
seq4910 289 7e-76
seq4374 255 1e-65
>seq4660
Length=54038
Score = 291 bits (322), Expect = 2e-76
Identities = 305/399 (76%), Gaps = 10/399 (3%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| |||||||||||||||||||||||| ||| || |||||||||||
Sbjct 4020 AAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCG 3961
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| ||||||||||||||| || | | ||||||||||||||| | |
Sbjct 3960 GATTTATTGGGTTTAAAGGGTGCGTAGGCTGTCTGTCAAGTCAGAGGTGAAATACCTGAG 3901
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
| ||| | || ||||| ||||| |||| |||| || | | | | | | |||||
Sbjct 3900 CCTAACTCAGGAACTGCCTTTGATACTGGCAGGCTGGAATACGGATGCCGTGGGAGGAAT 3841
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
||||||||||||||||||| ||||||||| ||||||| | |||||||| ||
Sbjct 3840 GAGTAGTGTAGCGGTGAAATGCATAGATATTACTCAGAACACCGATTGCGAAGGCATCTC 3781
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
| | || | |||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct 3780 ACGAATCCGTCATTGACGCTGAGGCACGAAAGCGTGGGGATCAAACAGGATTAGATACCC 3721
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA---AGTGCTCCGG 369
||||||||||||| ||||||||||| |||| ||||| | ||| ||| |||
Sbjct 3720 TGGTAGTCCACGCAGTAAACGATGATAACTAACCGTCGGCG---ATACACAGT----CGG 3668
Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
|| | ||| || || |||||| |||||||||||||||
Sbjct 3667 TGGCCAAGCGAAAGCGATAAGTTATCCACCTGGGGAGTA 3629
>seq4910
Length=11294
Score = 289 bits (320), Expect = 7e-76
Identities = 305/397 (77%), Gaps = 7/397 (2%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||| |||||||||||||||||||||| ||||| || || |||||| | ||
Sbjct 1727 AAGCACCGGCTAATTACGTGCCAGCAGCCGCGGTAACACGTAAGGTGCGAGCGTTGTTCG 1668
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||||| ||||||||||||| ||||| ||| |||||| | |||||| ||
Sbjct 1667 GAATTATTGGGCGTAAAGGGCATGTAGGCGGTCCGGTAAGTCGGGCGTGAAATCGCGGGG 1608
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG-GAGGGGCAAGTGGAA 191
| |||||||| | | || || ||||| || || |||| ||| |||| | | | ||||
Sbjct 1607 CCCAACCCCGCG-CGGCGCCCGATACTGCTGGTCTTGAGT-CAGCGAGGCGGAGGCGGAA 1550
Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251
||||| |||||| |||||||| |||||||| |||| ||||||| ||||||||||| ||
Sbjct 1549 TTCCTGGTGTAGGGGTGAAATCTGTAGATATCAGGAAGAACACCGGTGGCGAAGGCAGCC 1490
Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
| | | | |||||| |||||| |||| | | ||||||||||||||||||||||||
Sbjct 1489 TCCGAGCGCATGACTGACGCTGAGGTGCGAAGGTGCGGGGAGCAAACAGGATTAGATACC 1430
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371
|||||||||| | | |||||||||| ||| |||||| || | ||| | ||||
Sbjct 1429 CTGGTAGTCCGCACAGTAAACGATGCGCACTTGGTGTCCGGCC----AAGAGGCTGGGTG 1374
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
|| ||||||||| |||||| || |||||||||||
Sbjct 1373 CCAAAGCAAACGCGATAAGTGCGCCGCCTGGGGAGTA 1337
>seq4374
Length=59948
Score = 255 bits (282), Expect = 1e-65
Identities = 297/394 (75%), Gaps = 9/394 (2%)
Strand=Plus/Minus
Query 18 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT 77
|||||||| | |||||||||||||||||||||||| | || | |||||||||||| ||
Sbjct 3727 CCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGATTT 3668
Query 78 ACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAA 137
| |||| ||||||| ||| ||| || | ||||||| |||||| | |||||||
Sbjct 3667 ATTGGGTTTAAAGGGAGCGCAGGCGGGAAGTCAAGTCAGCCGTGAAATGTCCCGGCTCAA 3608
Query 138 CCCCGGGAC-TGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCT 196
|| ||| | ||| ||||||||| || | ||||| || |||| | |||| || |
Sbjct 3607 CC--GGGTCATGCGGTTGAAACTGTCTTTCTTGGGTGCACAAGAGGCAGGCGGAACTCGT 3550
Query 197 AGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTG 256
||||||||||||||||| ||||||| | || |||| || | |||||||| || ||| |
Sbjct 3549 GGTGTAGCGGTGAAATGCATAGATATCACGATGAACCCCGATTGCGAAGGCAGCCTGCCG 3490
Query 257 GACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 316
| ||| || ||| || | ||||||| ||| ||| | |||||||||||||||||||||||
Sbjct 3489 GGGTGTTACCGACGCTCATGCTCGAAGGCGCGGGTATCAAACAGGATTAGATACCCTGGT 3430
Query 317 AGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGC- 375
||||| ||| |||||||||| || | | || | ||| | | ||| | | |||||
Sbjct 3429 AGTCCGCGCGGTAAACGATGGATGCCCGCGGT-GTGGC-CTTTTGTGGT--TGCGCCGCC 3374
Query 376 -AGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
||| || || |||| || ||||||||||||||
Sbjct 3373 AAGCGAAAGCGTTAAGCATCCCACCTGGGGAGTA 3340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203138648832
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