Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq4234 425 2e-116
seq4374 394 3e-107
seq2436 313 8e-83
seq4660 311 3e-82
>seq4234
Length=168850
Score = 425 bits (470), Expect = 2e-116
Identities = 439/566 (78%), Gaps = 13/566 (2%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
|||||| ||| |||||| |||| ||| | |||| ||||||| |||||||||| |
Sbjct 87681 CGAGTCTGAAAGGGGCGAAGTGAGTCAGAGGGGGCAGACGCGAAACCGAGTGATCTACAC 87622
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
||| ||||||||||| |||||||||| |||||||||| || | | ||||||||
Sbjct 87621 ATGTCCAGGATGAAGTCCCGGTAACACGGGATGGAGGTCCGCACGGATAAGCGTTGAAAA 87562
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
| |||||| |||| ||||| ||||||||| || |||||| ||| |||||| || |
Sbjct 87561 GCTTCCCGATGAGGTGTGTGTAGGAGTGAAAGGCCAATCAAACTCGGAGATAGCTCGTAC 87502
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGC-ACTGT 235
|| |||||| |||||||| |||| | || || | | | |||||||| ||||
Sbjct 87501 TCCCCGAAAGGCATTTAGGTGCCGCCTGGGATGTTTCTCT-TGTGAGGTAGAGCGACTGA 87443
Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295
| ||| | | || | | | | || ||| | ||||||||||||||||| ||||
Sbjct 87442 T-TGGATGCGAGGGCTTCACCGCCTATCAAGTCCAGACAAACTCCGAATGCGCAAGAGTT 87384
Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| | ||||| ||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 87383 AAGTC-CTGGAGTAAGGGCGCGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCAGA 87325
Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415
| | | ||||||| ||||||||| ||||||||| ||||||| |||| | | ||||
Sbjct 87324 CCACCGGCTAAGGTCCCGAAATGTATGCTAAGTTAGACTAACGCAGTCCGGCCCCCAAGA 87265
Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 87264 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTCAAAGAGTGCGTAACAGCTCACTAG 87205
Query 476 TCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT- 534
|||||||| ||||||||||||||||||||||| ||| | ||||||| |||||||
Sbjct 87204 TCGAGGAGCTGGGCGTGGATAATAATCGGGTATAAAGCATATTGCCGAAGCCGTGGGATG 87145
Query 535 CATTTATATGATCGGTAGGGGAGCAT 560
|| ||| ||||||||||||||||
Sbjct 87144 CA---ATAGCATCGGTAGGGGAGCAT 87122
>seq4374
Length=59948
Score = 394 bits (436), Expect = 3e-107
Identities = 420/548 (77%), Gaps = 15/548 (3%)
Strand=Plus/Minus
Query 21 AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGT 80
|||| ||| | |||| ||||||| ||||||||||| || ||||| ||||| ||||
Sbjct 1458 AGTCTGTGGCGGCAGACGCGAAACCGGGTGATCTACCCGTGCCCAGGCTGAAGTCCCGGT 1399
Query 81 AACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTA 140
||| || |||||| ||||||| | | |||||||| | ||||||| || |||||
Sbjct 1398 AACGCGGGATGGAGGGCCGAACCGATAAGCGTTGAAAAGCTTCCGGATGAGGTGCGGGTA 1339
Query 141 GGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200
|| ||||||||| || ||||| ||| |||||| || ||| ||||||| ||||||||
Sbjct 1338 GGAGTGAAAGGCCAATCAAACCCGGAGATAGCTCGTACTCCCCGAAAAGCATTTAGGTGC 1279
Query 201 TGCCTCAAGTATCACCATCGGG-GGTAGAGC-ACTGTTATGGCTAGGGGGTCATTGCGAC 258
||||| || | | || || |||||||| ||||| ||| | | || | | || |
Sbjct 1278 TGCCTGTGGTGTTCCGCTCAGGAGGTAGAGCGACTGTC-TGGATGCGAGGGCTTCGCCGC 1220
Query 259 TTACCAAACCATTGCAAACTCCGAATGC----GCATCAGTTTTACCGCGGGAGTGAGGGC 314
|| ||| | | |||||||||||||| || || | | |||| ||||
Sbjct 1219 CTATCAAGTCCTGCCAAACTCCGAATGCCTGAGCGCCA-----AGCCATGGAGAAAGGGG 1165
Query 315 ATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGA 374
||||||||| |||||| ||||||||||||||||||| ||| | | ||||||||||||
Sbjct 1164 GCGGGTGCTAACGTCCGTTCCCGAGAGGAGAAGAATCCAGACCACCGTCTAAGGCCCCGA 1105
Query 375 AATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTG 434
| | ||||| ||||| |||||||||||| || ||| ||||||||| |||||||||||
Sbjct 1104 AGTCGCAGCTGAGTTAGGCTAACGAAGTCTCTTTCCTATGACAGCTAGCATGTTGGCTTG 1045
Query 435 GAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGA 494
|||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||
Sbjct 1044 GAAGCAGCCATTCATTCAAAGAGTGCGTAACAGCTCACTAGTCGAGGAATCAGGCATGGA 985
Query 495 TAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT--CATTTATATGATCGGTAG 552
||||||||||||| |||| || ||||||| ||||||| | ||| | | ||||||||
Sbjct 984 TAATAATCGGGTA-TAAGCTGCGCGCCGAAGCCGTGGGATGACTTTTTTGTCATCGGTAG 926
Query 553 GGGAGCAT 560
||||||||
Sbjct 925 GGGAGCAT 918
>seq2436
Length=67316
Score = 313 bits (346), Expect = 8e-83
Identities = 420/573 (73%), Gaps = 25/573 (4%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
|||||| |||||||||| | |||| | || |||| ||||||| ||||||||||||
Sbjct 671 CGAGTCTGAACAGGGCGCCGATAGTCACAAGGAACAGACGCGAAACCTAGTGATCTACCC 730
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
||| ||||| ||||| ||||||||||||| |||||| ||||||| | ||||||||
Sbjct 731 ATGACCAGGGTGAAGTGGCGGTAACACGCCATGGAGGCCCGAACCAGTTTCCGTTGAAAA 790
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
||||||| |||||||||| ||||||||| || |||||| ||| |||||| || |
Sbjct 791 GGGCTTGGATGAGTTGTGGGTAGGAGTGAAAGGCCAATCAAACTGGGAGATAGCTCGTAC 850
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGC-ACTGTTA 237
|| |||||| | |||||| | ||||| || | | | |||| ||| |||| ||
Sbjct 851 TCCCCGAAATGTCTTTAGGGACAGCCTCGGACATGATTACGTGAGGTAAAGCTACTGATA 910
Query 238 TG--GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295
| || ||| |||| | | | ||||| | | ||||||| |||||||| | ||
Sbjct 911 GGATGCGGGGGCTTCATCG---CCTGCCAAATCCTGACAAACTCTGAATGCGCGTAAGAC 967
Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| | |||||||||| ||||||||| ||||| ||| ||| |||| || ||
Sbjct 968 TGAGTCCGGGAGTGAGTCGTCGGGTGCTAATATCCGTCGGCGAAAGGGTAAGAGCCCAGA 1027
Query 356 CTATCAGCTAAGGCCCCGAAATGACAG-CTAAGTT-AAAC-TAACGAAGTCTGATTGCTA 412
| | |||| |||||||||||| || | |||||| | || ||||| || || ||
Sbjct 1028 CCAACAGCCAAGGCCCCGAAA-CACGGTTTAAGTTGAGACAGAACGAGGTGACATCGCAG 1086
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 1087 TGACAGCTAGGATGTTAGCTTGGAAGCAGCTATTCATTCAAAGAGTGCGTAACAGCTCAC 1146
Query 473 TAGTCGA--GGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530
||||||| ||||| |||||||| || | |||| || ||| | ||||||| ||
Sbjct 1147 TAGTCGAGCGGAGT--TGCGTGGATGATGAGCGGGCATCAAGACCGTTGCCGAAGCTATG 1204
Query 531 GGAT---CATTTATATGATCGGTAGGGGAGCAT 560
|||| || | ||||||||||||||||
Sbjct 1205 GGATGCGCA-----AGCATCGGTAGGGGAGCAT 1232
>seq4660
Length=54038
Score = 311 bits (344), Expect = 3e-82
Identities = 388/522 (74%), Gaps = 20/522 (4%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| |||||||||| |||| || | | |||| ||||||| |||||||||||||
Sbjct 2054 CGAGTCTGAACAGGGCGCTTGAGTCAGTGCGAGCAGACGCGAAACCTAGTGATCTACCCA 1995
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|||||||| ||||||| | |||||| | ||||||| ||||||| | ||||||||
Sbjct 1994 TGGCCAGGGTGAAGGTACCGTAACAGGTACTGGAGGCCCGAACCAGTTTCCGTTGAAAAG 1935
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
|||||||||||||||||| ||||||||| || |||||| ||| |||||| || ||
Sbjct 1934 GGCTTGGATGAGCTGTGGGTAGGAGTGAAAGGCCAATCAAACTGGGAGATAGCTCGTACT 1875
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGC-ACTGTTAT 238
| |||||| | |||||| | ||||| ||| | | |||||||| |||| ||
Sbjct 1874 CCCCGAAATGTCTTTAGGGACAGCCTCGGTTATGATTGCGTGAGGTAGAGCTACTGATAG 1815
Query 239 GGCTAGGGGG--TCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCA----TCA 292
| || ||| |||| || || | | | |||||||||||||||| |||
Sbjct 1814 GAAAAGAGGGCTTCATCGCC---TATCGATTTCTGACAAACTCCGAATGCGCGCAATTCA 1758
Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352
| || |||||||||| ||||||||| ||||| ||| ||| |||| ||
Sbjct 1757 GATTC----CGGGAGTGAGTCGTCGGGTGCTAATATCCGTCGGCGAAAGGGTAAGAGCCC 1702
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCT-AAGTTAA-ACTAA-CGAAGTCTGATTG 409
||| ||||||||||||||||| | ||| | ||||| | || || |||||| | |
Sbjct 1701 AGACCTTCAGCTAAGGCCCCGAAGAG-CAGTTTAAGTTGAGACGAAACGAAGTGACACCG 1643
Query 410 CTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCT 469
| ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||
Sbjct 1642 CCAAGACAGCTAGGATGTTAGCTTGGAAGCAGCTATTCATTCAAAGAGTGCGTAACAGCT 1583
Query 470 CACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAA 511
||||||||||| || |||||||| || | |||| |||||
Sbjct 1582 CACTAGTCGAGCGGTGATGCGTGGATGATGACCGGGCATTAA 1541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689513847296
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