Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq2436 318 2e-84
seq4234 315 2e-83
seq4660 302 2e-79
seq4374 228 3e-57
>seq2436
Length=67316
Score = 318 bits (352), Expect = 2e-84
Identities = 414/568 (73%), Gaps = 32/568 (6%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| |||||| ||||||||| | ||| ||| | ||||| | | |||||||
Sbjct 2342 TCGACTTGTGAGTCTCTCAGTCAAGCCCGCTTATGCCACTGCACTCTACGCGCGATTGCC 2283
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| || |||||| | ||||| || ||||||||||| ||| ||||| | ||| ||||||
Sbjct 2282 ATCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTACGCTTTTGGAGG-CGACCACCCCAG 2224
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||||||||||| || ||||| || | | | |||||| || |
Sbjct 2223 TCAAACTACCCACCAAGCGGTGTCCT---------TCTTACG---AAGTTAGA---CCCC 2179
Query 181 TACGGTCAGA---GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| |||| ||||||||||| ||| |||||||| |||||||| |||| |||
Sbjct 2178 GGGCGCCAGAAGGGTGGTATTTCACCAATGACTCCACGGGTACTAGCGTACCCGCCTCAC 2119
Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT 297
|||||||||||||||||||||| | | || || | |||||||||| |||||
Sbjct 2118 AGTCTCCCACCTATCCTACACATCTGACGTCCAAGATCAGCGCTAAGCTATAGTAAAGGT 2059
Query 298 CC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCA 356
| |||||||||||||||| | ||| | | ||||||| || ||| ||||||||
Sbjct 2058 TCACGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCA 1999
Query 357 CCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTT 415
||| || ||| |||||||| | || ||||||| ||||||||||||||||||||||
Sbjct 1998 CCGAGCTCATGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTT 1940
Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGG 475
||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||
Sbjct 1939 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAACGGGG 1880
Query 476 CTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGC 535
|||| ||| || ||| || ||| | |||||||||||||| |
Sbjct 1879 CTTCGATT----------CAGACCTTCGCTTGCGCTGAGCCCCCCTCTTAACCTTCCGTC 1830
Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563
|||||||||| ||||| || ||| |||
Sbjct 1829 ACCGGGCAGGTGTCAGGCCACATATCTC 1802
>seq4234
Length=168850
Score = 315 bits (348), Expect = 2e-83
Identities = 411/558 (74%), Gaps = 32/558 (6%)
Strand=Plus/Plus
Query 14 CTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAGG 73
||| ||||||||| ||||| ||| |||||||| | | || |||| | | |||||
Sbjct 85991 CTCCCAGTCAAGCACCCTTTTGCCATTACACTCTGACGCCGGTTACCAATCGGCGTGAGG 86050
Query 74 GAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCAC 133
| |||||| || ||||||||||| ||| ||||| | ||| ||||||| |||||||||||
Sbjct 86051 GTACCTTTAGGAGCCTCCGTTACGCTTTTGGAGG-CGACCACCCCAGTCAAACTACCCAC 86109
Query 134 CAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTG 193
|| || | |||| | | || |||| |||| | ||| || | || || |
Sbjct 86110 CAAGCGCGGTCCTT------GCTACTG---CAAG-TTAGG-ACCCAG-ACAGCCAAAGGG 86157
Query 194 --GTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTAT 251
||||||||||| || ||||||| ||| |||| || |||| | |||| |||||
Sbjct 86158 CCGTATTTCAACAGCGGCTCCACACATACTGGCGTACATGCTTCATTGCCTCCGGCCTAT 86217
Query 252 CCTACACAAACCGCA--CCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTT 308
|||||||| || | || || |||| | |||||||||| ||||| | |||||||||
Sbjct 86218 CCTACACAT--CGAATGCCCAAGTCCAACGCTAAGCTATAGTAAAGGTTCACGGGGTCTT 86275
Query 309 TTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGG 368
||||||| |||| | || ||||||| || |||| ||||||||| |||| ||
Sbjct 86276 TTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGGGCTCACGG 86335
Query 369 TTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428
||||||||| | || |||| |||||||||||||||||||||||||||||||||||
Sbjct 86336 TTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 86395
Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCG 488
|||||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 86396 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATT----- 86450
Query 489 CCTCACACACCACGTG-GTGTGC-TCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGC 546
|| ||| || | || | | ||||||||||||||| ||||||||||||
Sbjct 86451 -----CAGACCTTCTGCCTAAGCATAAGCCCTCCTCTTAACCTTCCGGCACCGGGCAGGT 86505
Query 547 GTCAGTCCGTATACCTCG 564
||||| | ||||||| ||
Sbjct 86506 GTCAGACTGTATACCGCG 86523
>seq4660
Length=54038
Score = 302 bits (334), Expect = 2e-79
Identities = 405/557 (73%), Gaps = 25/557 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| ||||| ||||||||| | ||| ||| | ||||| | | |||||||
Sbjct 378 TCGACTTGTTTGTCTCCCAGTCAAGCCCGCTTATGCCACTGCACTCTTCGCGCGATTGCC 437
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| || |||||| | ||||| || ||||||||||| ||| ||||| | ||| ||||||
Sbjct 438 ATCCGCGCTGAGCGGACCTTGGGAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 496
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
| ||||||||||||| || ||||| | | ||| | |||| || | | | |
Sbjct 497 TCAAACTACCCACCAAGCGGTGTCCATCTCTC-GATGTTAGGCCCCGG---GCGAGCAA- 551
Query 181 TACGGTCAGAGTGGTATTTCAACAA-CGACTCCACAACCACTAGCGTGGCCGCATCATAG 239
|| |||||||||||| ||||||||| | |||||||| |||| || ||
Sbjct 552 -------AGGGTGGTATTTCAATTGGCGACTCCACGAGAACTAGCGTTCCCGCTTCGCAG 604
Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
|||||||||||| ||||||| | | | || ||| | |||||||||| ||||| |
Sbjct 605 TCTCCCACCTATGCTACACATCACTCGTCCAAGACCAGCGCTAAGCTATAGTAAAGGTTC 664
Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
|||||||||||||||| | ||| | | ||||||| || ||| ||||||||||
Sbjct 665 ACGGGGTCTTTTCGTCCCGTTGCGGGTAGGCGGCATCTTCACCGCCACTACAATTTCACC 724
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418
| || || |||||||| | ||||||| |||||||||||||||||||||||||
Sbjct 725 GAGCTCACGGCTGAGACAGTATCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACC 784
Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478
|||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||
Sbjct 785 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAACGGGGCTT 844
Query 479 CAATTACCCGCCTCACACACCACGTGGTGTG-CTCACGAGTCCTCTTAACCTTCCAGCAC 537
| || ||| || | || || | || | |||||||||||||| |||
Sbjct 845 CGAT--------TCAGAC-CTTCGGCTTGCGCCTAAGCCCCCCTCTTAACCTTCCGTCAC 895
Query 538 CGGGCAGGCGTCAGTCC 554
|||||||| ||||| ||
Sbjct 896 CGGGCAGGTGTCAGGCC 912
>seq4374
Length=59948
Score = 228 bits (252), Expect = 3e-57
Identities = 249/324 (77%), Gaps = 15/324 (5%)
Strand=Plus/Plus
Query 241 CTCCCACCTATCCTACACAAACC--GCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298
|||| ||||||||||||| | || ||| | || | || ||||| ||| |||||
Sbjct 3 CTCCGGCCTATCCTACACATCCGATGC-CCGGACGC-AGCACTAAGCTGCAGTAAAGGTT 60
Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357
| |||||||||||||||| |||| | || ||||| | || |||| |||||||||
Sbjct 61 CACGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCATCACCGATACTACAATTTCAC 120
Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417
||||| | ||||||||||| | || |||| ||||||||||||||||||||||||
Sbjct 121 CGGGCTCGCGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTAC 180
Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477
||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 181 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCT 240
Query 478 TCAATTACCCGCCTCACACACCACGTGGTG-TGCTCACGAGTCCTCTTAACCTTCCAGCA 536
|||| ||||||| | || || ||| | ||||||||||||||| |||
Sbjct 241 TCAA--------CTCACAC-CTTCGCCTTGCGGCTGAGCGCTCCTCTTAACCTTCCGGCA 291
Query 537 CCGGGCAGGCGTCAGTCCGTATAC 560
||||||||| ||||| | ||||||
Sbjct 292 CCGGGCAGGTGTCAGGCTGTATAC 315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702313194624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |