Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_031941.1 Length=34563 Score E Sequences producing significant alignments: (Bits) Value seq4003 96.9 8e-16 >seq4003 Length=65316 Score = 96.9 bits (106), Expect = 8e-16 Identities = 203/300 (68%), Gaps = 11/300 (4%) Strand=Plus/Minus Query 29704 GGATAAATCCGCCTTGTTTTCTAATAGCTGGCAAGACCTCTGATGTCACCCAACGCTTGA 29763 ||||| |||| ||| | | | ||| |||| ||||| ||||||||||||||||| Sbjct 22894 GGATATATCCACCTGTTCTACCAATTTGAGGCAGCACCTCACTTGTCACCCAACGCTTGA 22835 Query 29764 ACTCTCTAGCTTGTGGAAGCTTACTTGAAAGAATGAGAGAGTAGAGGCCAGATTCGTTGA 29823 | | |||| ||| | ||| || || || |||||||| || || || ||||||| Sbjct 22834 AAGCCTTAGCCTGTTCCAACTTCGAAGAGAGGATAAGAGAGTACAGACCCGACTCGTTGA 22775 Query 29824 TGATGATAGGATTTTGATTTCTACCCATGGCGTCACGAATCGTTACCCCATCTGTCTTAT 29883 ||| ||| ||| | || ||| || |||||||||| | ||| ||| | Sbjct 22774 TGAGGATTACTTTTCGGTTCTGACC--TGAGAGAACGAATCGTTCCTCCA----GCTTGT 22721 Query 29884 CATCTTCATCTACATGGTCAAAAATTGCTTTTCTTGAATTTGTATACCCCAAGATATCCG 29943 | |||| |||||||||||| || ||||| ||| ||| |||||||||| | | Sbjct 22720 CTTCTTTATCTACATGGTCGCGTATGGCTTTAGTTGTATTGTTATACCCCAACGCCTGTG 22661 Query 29944 CAACATCTTTCCCAACGAACCAAGGCTCGTCA----TCAATTGTCAAAGTACGGACTTCC 29999 | ||||| || || ||||| || ||| || ||| |||||| ||| |||| |||| Sbjct 22660 CCACATCCTTGCCTACGAAGAAAACCTC-ACACCTTTCATTTGTCAGAGTCCGGATTTCC 22602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110473310366950