Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq70590 107 3e-21
seq45446 104 4e-20
seq69891 89.7 8e-16
>seq70590
Length=429005
Score = 107 bits (118), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 37 TGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCC 96
|||| | | |||||| |||||| ||||||| | | || ||||||||| ||||||
Sbjct 278575 TGACCCACACTTACTGGGAATT-CCTCGTTCATGGGGAATAATTGCAATCCCTGATCCCC 278633
Query 97 ATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGA 155
||||||| ||||| | ||||| | ||||| |||| ||| | || || |||
Sbjct 278634 ATCACGAATGGGGTTCAACGGGTTACCTGCACCTGCCGGCGCAGGGTAGGCACACGGTGA 278693
Query 156 ATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 215
|||||||||| ||||||| |||| | ||||||||||||||| ||||||||||||
Sbjct 278694 GCCAGTCAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCTTAGACCTGTTATT 278753
Query 216 GCCTCAAACTTCCGTGGC 233
| ||||| || |||||
Sbjct 278754 G-CTCAATCTCAGGTGGC 278770
>seq45446
Length=1454406
Score = 104 bits (114), Expect = 4e-20
Identities = 169/235 (72%), Gaps = 10/235 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| ||||||||| || |||| ||||| ||||| || |||||| |||||| |
Sbjct 805216 GTACAAAAGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGTACTTACTGGGAATT-C 805163
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || || ||||||| ||| ||||||| | ||||| | ||
Sbjct 805162 CTCGTTCATGGGGAATAACTGCAATGCCTGATCGCCATCACTAATGGGGTTCAATGGGTT 805103
Query 120 ACCCGGACCTGTCGGC-CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| |||| | || | |||| | || | ||| ||||||||| ||| ||||
Sbjct 805102 ACCCACGCCTGCCAGCACCAGGT-AGGCACATGCTGAGCCAGTCAGTGTAGTGCGTGTGC 805044
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | ||||||||||||| ||||||||||||||| ||||| || |||||
Sbjct 805043 AGCCCCGGACATCTAAGGGCACTACAGACCTGTTATTG-CTCAATCTCGGGTGGC 804990
>seq69891
Length=1360345
Score = 89.7 bits (98), Expect = 8e-16
Identities = 133/182 (73%), Gaps = 5/182 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||| |||
Sbjct 1052534 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGAC-CGCACTTACTGGGAA-TTC 1052478
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCA-CGATGAAATTTCAAAGATT 119
|||||| | | || ||||||||| | || ||||||| | ||| || | | ||
Sbjct 1052477 CTCGTTCATGGGGAATAATTGCAATCCCCGAT-CCCATCACCAATGGGGTTCAACGGGTT 1052419
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| ||| ||| | || || ||| ||||||||||||| ||||
Sbjct 1052418 ACCCGCGCCTGCCGGAGTAGGCTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGAGTGCA 1052359
Query 180 GC 181
||
Sbjct 1052358 GC 1052357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751436723800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |