Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq70590 100 5e-19 >seq70590 Length=429005 Score = 100 bits (110), Expect = 5e-19 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | ||||||||||||||||||| | | || | | |||||||| ||||| Sbjct 279367 GAATAGGACC-GTGGTTCTATTTTGTTGGTTTTTGGAACTGAGGCCATGATTAAGAGGGA 279309 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | | | |||| | ||||| | |||||||||||||||||| ||||| Sbjct 279308 TGGCCAGGGGCATTGGTATTGCACCACTAGAGGTGAAATTCTTGGACCAGCGCAAGACAG 279249 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || | | |||||| || ||||| |||||||||||||||| ||| ||||||| Sbjct 279248 ACCAGAGTGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGTT 279196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914492367360