Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq13052 131 7e-28
seq6873 118 4e-24
seq5438 118 4e-24
seq10053 109 2e-21
seq3382 109 2e-21
seq10214 105 3e-20
seq48502 102 3e-19
seq35270 96.9 1e-17
seq23984 89.7 2e-15
seq17214 89.7 2e-15
seq3292 89.7 2e-15
seq57702 87.8 7e-15
seq70417 80.6 1e-12
seq63175 78.8 4e-12
seq1123 78.8 4e-12
seq35624 77.0 1e-11
seq10985 77.0 1e-11
>seq13052
Length=681615
Score = 131 bits (144), Expect = 7e-28
Identities = 101/120 (84%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||| |||||||| ||||| | ||||||| | |||| |||||||||||||||||||
Sbjct 284001 TGTTAGGAGCCGAAAGACGGTGATCCATGCCTGGACAGGGCGAAGCCAGAGGAAACTCTG 283942
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 283941 GTGGAGGTCCCTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 283882
>seq6873
Length=2177
Score = 118 bits (130), Expect = 4e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct 492 TGTTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGATGAAGGCAGAGGAAACTCTG 551
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | ||| | || ||||||||||| | ||| | |||||||||||||||
Sbjct 552 GTGGAGGACCATAGCAATCCTAACGTGCAAATCGGTTGTCTGACCTGGGTATAGGGGCGA 611
>seq5438
Length=1959
Score = 118 bits (130), Expect = 4e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct 389 TGTTAGGACCTGAAAGATGGTGAACTATGCCTGCGCAGGATGAAGGCAGAGGAAACTCTG 448
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| |||| | ||| | ||| ||||||||||| | ||| | |||||||||||||||
Sbjct 449 GTAGAGGACCATAGCAATCCTGACGTGCAAATCGGTTGTCTGACCTGGGTATAGGGGCGA 508
>seq10053
Length=664014
Score = 109 bits (120), Expect = 2e-21
Identities = 92/113 (81%), Gaps = 4/113 (4%)
Strand=Plus/Minus
Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634
||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||
Sbjct 128422 GAAAGATGGTGAACTGTGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCG 128363
Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTC----AAATTTGGGTATAGGGGCGA 683
|||||| ||| ||||||||||| || || | ||||| |||||||||
Sbjct 128362 TAGCGGTCCTGACGTGCAAATCGGTCATCCGGTCGACCTGGGTGTAGGGGCGA 128310
>seq3382
Length=5189373
Score = 109 bits (120), Expect = 2e-21
Identities = 105/135 (78%), Gaps = 6/135 (4%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||||| |||| ||||| |||||||||||||||||| ||| |||| ||||||| ||
Sbjct 4749767 GAGCATACATGTTAGGACCGGAAAGATGGTGAACTATGTCTGGGCAGGGCGAAGCCACAG 4749826
Query 615 GAAACTCTGGTGGAGGCTC------GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||| | | |||||| ||| |||||||||| ||||| |
Sbjct 4749827 GAAACTCTGGTGGAGGTCCGTAGCGGTAGCGGTCCTGATGTGCAAATCGGTCGTCTGACC 4749886
Query 669 TGGGTATAGGGGCGA 683
|||||||||| ||
Sbjct 4749887 CAGGTATAGGGGTGA 4749901
>seq10214
Length=847930
Score = 105 bits (116), Expect = 3e-20
Identities = 120/160 (75%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || |||| |||||| | | ||||| |||||||
Sbjct 398722 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 398663
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| |||||| |||| ||||||| | | |||| | ||||| ||||| ||
Sbjct 398662 ACCGGCACGAGACCAATAGTCAACAAGTACCATAAGGAAAAGTTAAAAAGAACTTT--AA 398605
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||| ||| |||| | ||| || ||
Sbjct 398604 AGAGAGTTCAAGAGAGCGTAAAACTGTTAAGAGGTAAACG 398565
>seq48502
Length=3436129
Score = 102 bits (112), Expect = 3e-19
Identities = 119/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| |||||||| | || |||| |||||| | | ||||| |||||||
Sbjct 939447 GAGTCGGGTTGCTTGAAAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 939506
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| | ||||| ||||| ||
Sbjct 939507 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAAGGAAAGTTAAAAAGAACTTT--AA 939564
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || || ||| ||| | ||| || ||
Sbjct 939565 AGAGAGTTCAAGAGGGTGTAAAACCGTTAAGAGGTAAACG 939604
>seq35270
Length=166989
Score = 96.9 bits (106), Expect = 1e-17
Identities = 116/157 (74%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||| ||||||||| | || |||| |||||| | | ||||| |||||||
Sbjct 31245 GAGTTGGGTTGCTTGAGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 31304
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | |||| | ||||| ||||| ||
Sbjct 31305 ACCGGCACGAGACCGATAGTCAACAAGTACTGTAAAGAAAAGTTAAAAAGAACTTT--AA 31362
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||||||| || || || ||| ||| | ||| ||
Sbjct 31363 AGAGAGTTCAAGAGGGTGTAAAACCGTTAAGAGGTAA 31399
>seq23984
Length=16077
Score = 89.7 bits (98), Expect = 2e-15
Identities = 117/160 (73%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||| ||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 426 GAGTTGGGTTGCTTGAGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 485
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| | |||| ||||| ||
Sbjct 486 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAATGAAAG-TTAAAAAAACTTT--AA 542
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || || ||| ||| | ||| || ||
Sbjct 543 AGAGAGTTCAAGAGGGTGTAAAACCGTTAAGAGGTAAACG 582
>seq17214
Length=55720
Score = 89.7 bits (98), Expect = 2e-15
Identities = 97/128 (76%), Gaps = 2/128 (2%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| ||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 2212 GAGTCGGGTTGCTTGAGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 2153
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||| ||| || | ||||| | |||| ||||| ||
Sbjct 2152 ACCGGCACGAGACCGATAGTCAACACGTACAGAAAAGGAAAGTTAAAAAAAACTTT--AA 2095
Query 160 AGAGAGTT 167
||||||||
Sbjct 2094 AGAGAGTT 2087
>seq3292
Length=7324000
Score = 89.7 bits (98), Expect = 2e-15
Identities = 93/121 (77%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| || ||| ||||||||||||||||||||| | | | ||||||||||||| |||
Sbjct 2510887 TGTTAGGGCCCAAAAGATGGTGAACTATGCCTGGACGGAGCGAAGCCAGAGGAAGCTCCA 2510946
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA-GGGGCG 682
| || || | || ||| ||| | ||||||| | ||||| | |||||||| ||||||
Sbjct 2510947 GCGGCGGTCCATAGTGGTCCTGACATGCAAATTGGTCGTCCGACCTGGGTATATGGGGCG 2511006
Query 683 A 683
|
Sbjct 2511007 A 2511007
>seq57702
Length=507167
Score = 87.8 bits (96), Expect = 7e-15
Identities = 114/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||| |
Sbjct 250074 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAACT 250015
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||| |||| ||||||| || | |||| | |||| ||||| ||
Sbjct 250014 ACCGGCACAAGACCAATAGTCAACAAGTACTGTAAAAAAAAGTTAAAAAAAACTTT--AA 249957
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||||||| || || ||| ||| ||| | ||| ||
Sbjct 249956 AGAGAGTTCAAGAGGGCGTAAAACCGTTAAGAGGTAA 249920
>seq70417
Length=373
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|||||||||||| |||||||||||| | || | || ||||||||||||||||||||||
Sbjct 350 TGGGACCCGAAATATGGTGAACTATCCTTGGGCAAGGAGAAGCCAGAGGAAACTCTGGTG 291
Query 627 GAGG 630
||||
Sbjct 290 GAGG 287
>seq63175
Length=1720526
Score = 78.8 bits (86), Expect = 4e-12
Identities = 87/116 (75%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| ||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| |
Sbjct 1294529 TTAGGACCTGAAAGATAGTGAACTCTGCCTGGGCAGGAAGAAGCCAGAGGAAACTCTACT 1294588
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
||||| || || | ||| |||| | |||| || || | ||| || ||||||
Sbjct 1294589 GGAGGTCCGTAGTCATCCTGACGTGTAGATCGGTCATCTGACCTGGCTACAGGGGC 1294644
>seq1123
Length=454124
Score = 78.8 bits (86), Expect = 4e-12
Identities = 63/76 (83%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
||| | |||| |||||||||||||||| ||| |||||||||||||||||||| |||||
Sbjct 22134 GACTCAAAAGTTGGTGAACTATGCCTGGGCAGGATGAAGCCAGAGGAAACTCTGATGGAG 22075
Query 630 GCTCGCAGCGGTTCTG 645
| || ||| || |||
Sbjct 22074 GTTCATAGCAGTCCTG 22059
>seq35624
Length=1143573
Score = 77.0 bits (84), Expect = 1e-11
Identities = 77/99 (78%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
||| | ||| ||||||||||||||| |||||| |||| |||||||||||||| ||||
Sbjct 790252 GTTAGTACCGGAAAGATGGTGAACTGTGCCTGGGCAGGGCGAAGCCAGAGGAAA--CTGG 790309
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
|| ||| | ||||| ||| |||||| || |||||
Sbjct 790310 TGAAGGTCCATTGCGGTCCTGACGTGCAGGTCAGTCGTC 790348
>seq10985
Length=29816
Score = 77.0 bits (84), Expect = 1e-11
Identities = 111/157 (71%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || ||| |||||| | |||| |||||||
Sbjct 29594 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCTATCTAGGGCTAAAT 29653
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || |||| |||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 29654 ACAAGCACAAGACTGATACTCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTGAAG 29713
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
| ||||| || || | ||||| ||| | ||| ||
Sbjct 29714 AATGAGTTCAAGAGGGCCTGAAACCGTTAAGAGGTAA 29750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078341486000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |