Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq70590 199 6e-49
seq69891 143 4e-32
seq77169 140 5e-31
seq59202 123 4e-26
seq47268 122 1e-25
seq31139 120 5e-25
seq13422 111 3e-22
seq31756 105 1e-20
seq74433 91.5 2e-16
seq45446 87.8 3e-15
seq31357 80.6 4e-13
seq50413 78.8 1e-12
seq62145 73.4 6e-11
>seq70590
Length=429005
Score = 199 bits (220), Expect = 6e-49
Identities = 208/266 (78%), Gaps = 14/266 (5%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
|| ||||| | ||||||||||| ||||||| |||| | ||||||||||||||| |||
Sbjct 278685 ACACGGTGAGCCAGTCAGTGTAGCACGCGTGCAGCCCCGGACATCTAAGGGCATCTTAGA 278744
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||| |||| || | |||||| | |||| | |||||||||||||| ||
Sbjct 278745 CCTGTTATTGC-TCAATCT-CAGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTAGGG 278802
Query 122 A---CCAACCATAGTCGA-TGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTAT 172
|| |||| ||| || || || |||||| | | |||||| | |||||
Sbjct 278803 GATGCCGACCAC--TCGGGTGTTGCATAACTAGTTAGCATGCCAGAGTCTCGATTGTTAT 278860
Query 173 CGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAG 232
||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||| |
Sbjct 278861 CGGAATTAATCAGAAAAATCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCA-GG 278919
Query 233 AATCAAGAAAGAGCTATCAATCTGTC 258
||| |||||||||||||||||||||
Sbjct 278920 AATTGAGAAAGAGCTATCAATCTGTC 278945
>seq69891
Length=1360345
Score = 143 bits (158), Expect = 4e-32
Identities = 145/185 (78%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111
|||||||||||||||||| || |||| || | || ||| | |||| | ||||||||||
Sbjct 1052358 GCATCACAGACCTGTTATCGC-TCAATCT-CAGGTGACTGAACGCCACTTGTCCCTCTAA 1052301
Query 112 GAAGCCAGC---CACCAACCATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGT 165
|||| | | || ||| | | | | | | ||| |||||| | | |||||||
Sbjct 1052300 GAAGTTGGGGGACGCCGACCGTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGT 1052241
Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1052240 TCCTTATCGGAATTAACCAGACAAATCCCTCCACCAACTAAGAACGGCCATGCACCACCA 1052181
Query 226 CCCAT 230
|| ||
Sbjct 1052180 CCAAT 1052176
>seq77169
Length=3228702
Score = 140 bits (154), Expect = 5e-31
Identities = 91/100 (91%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||||
Sbjct 718924 GTCTCCTTCGTTATCGGAGTTAACCAGACAAATCACTTTACCAGCTAAGAACGGCCATGC 718983
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||| ||||||| |||||| ||||||
Sbjct 718984 ACCACCACCCACAGAATCGAGAAAGAACTATCAGTCTGTC 719023
>seq59202
Length=1088861
Score = 123 bits (136), Expect = 4e-26
Identities = 99/118 (84%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
|||| |||||| | | ||||| || |||||| ||||||||||||||| || |||||||
Sbjct 819405 GCTAGTTAGCATGCCAGAGTCTCATTTGTTATCAGAATTAACCAGACAATTC-CTCCACC 819463
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||| | |||| |||||||| ||||||||||||
Sbjct 819464 TTCTAAGAACGGCCATGCACCACCACCTACGGAATTGAGAAAGAGTTATCAATCTGTC 819521
>seq47268
Length=609280
Score = 122 bits (134), Expect = 1e-25
Identities = 182/251 (73%), Gaps = 17/251 (7%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA--CCTGTTATTGCCT 74
||||| || || ||| |||| ||||| |||||||||||||| ||||||| |||
Sbjct 460830 CAGTGCAGTGCTTATGCAGCCCCAGACATCCAAGGGCATCACAGATGCCTGTTAGC-CCT 460772
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAAC--CA 129
|| || | ||||| | |||| |||| |||||||||| | ||||||| |
Sbjct 460771 CAGTCTCAGAG-GGCTGAATGCCACGTGTCCTTCTAAGAAGCTGGGGGACACCAACTGCT 460713
Query 130 TAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
|| | || |||| |||||| | | |||| ||||||||| |||||||||| ||
Sbjct 460712 CAGGGGGTGCCTAGCTAGTTAGCATGCCAGAGTCTTTTTCGTTATCAGAATTAACCAAAC 460653
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
|||| |||||||| |||| |||||||||||||| |||| |||| |||||||||
Sbjct 460652 AAATTGCTCCACCAG----GAACAGCCATGCACCACCATCCATGGAATGGAGAAAGAGC- 460598
Query 248 ATCAATCTGTC 258
||||||||||
Sbjct 460597 -TCAATCTGTC 460588
>seq31139
Length=1645295
Score = 120 bits (132), Expect = 5e-25
Identities = 84/95 (88%), Gaps = 8/95 (8%)
Strand=Plus/Minus
Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223
||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct 1556387 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACC----AAGAATGTCCATGCACCA- 1556333
Query 224 CACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||| |||||||||||||||||||||||||||
Sbjct 1556332 ---CCATGGAATCAAGAAAGAGCTATCAATCTGTC 1556301
>seq13422
Length=2171933
Score = 111 bits (122), Expect = 3e-22
Identities = 75/84 (89%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233
|||||||||||||||||| |||||| ||||||||| ||||| | ||||||||||| |||
Sbjct 235953 GGAATTAACCAGACAAATTGCTCCACTAACTAAGAATGGCCAAGTACCACCACCCACAGA 235894
Query 234 ATCAAGAAAGAGCTATCAATCTGT 257
| |||||||||||| |||||||||
Sbjct 235893 ACCAAGAAAGAGCTGTCAATCTGT 235870
>seq31756
Length=287592
Score = 105 bits (116), Expect = 1e-20
Identities = 178/253 (70%), Gaps = 30/253 (12%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| | | || |||| || |||| |||||||||||||| ||||| ||| ||
Sbjct 78131 GTCAGTGTAGCACATGCGCAGCCCCGAGCATCGAAGGGCATCACAGAACTGTTGTTG-CT 78073
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------CCAGCCACCA 125
||| ||| |||||| | |||| | |||||||||||||| | | || |
Sbjct 78072 CAACCTT-GGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCTGACAGC- 78015
Query 126 ACCATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184
| ||| | || | ||| |||||| | | ||||| || |||||| |||||||||
Sbjct 78014 TCGGGAGTTGCAT--GACTAGTTAGCATGCCAGAGTCTCATTTGTTATCAGAATTAACCT 77957
Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244
|| | |||||| | | |||||||||||||||||| |||||| || ||
Sbjct 77956 GATATATCACTTC-----------ATGGCCATGCACCACCACCCGCAGAATCGAG---GA 77911
Query 245 G-CTATCAATCTG 256
| |||||||||||
Sbjct 77910 GTCTATCAATCTG 77898
>seq74433
Length=1485305
Score = 91.5 bits (100), Expect = 2e-16
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| || | || |||||||| || ||||| | |||||||| | |||| |||||||
Sbjct 522675 GTCTCATTTGACATAGGAATTAAGCAAACAAACCTTTCCACCAATTCAGAATGGCCATGT 522616
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||| ||| |||||||||||| | ||||| ||||||
Sbjct 522615 ACCACCAGCCACAGAATCAAGAAAAAAATATCAGTCTGTC 522576
>seq45446
Length=1454406
Score = 87.8 bits (96), Expect = 3e-15
Identities = 79/97 (81%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||| ||| |||| |||| | ||||||||||||| ||||||||||||||| ||
Sbjct 805062 GTCAGTGTAGTGCGTGTGCAGCCCCGGACATCTAAGGGCACTACAGACCTGTTATTG-CT 805004
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111
||| | || |||||| | |||| | ||| ||||||
Sbjct 805003 CAATC-TCGGGTGGCTGAACGCCACTTGTCACTCTAA 804968
>seq31357
Length=1604567
Score = 80.6 bits (88), Expect = 4e-13
Identities = 73/93 (78%), Gaps = 8/93 (9%)
Strand=Plus/Plus
Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225
|| |||| ||||||||| ||| ||||| ||||| || |||||||||||||||
Sbjct 1165790 TCCTTATTGGAATTAACTAGAAAAATCGCTCCATGAA--------GGCCATGCACCACCA 1165841
Query 226 CCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||| ||||| ||||||||||||||||| |||
Sbjct 1165842 TCCACGGAATCCAGAAAGAGCTATCAATCAGTC 1165874
>seq50413
Length=570718
Score = 78.8 bits (86), Expect = 1e-12
Identities = 60/71 (85%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||| ||||||||||||||||||| |||||||||||||||||| || | || ||| ||
Sbjct 298007 AAAGCACTCCACCAACTAAGAACACCCATGCACCACCACCCATTGACTGAAAAAACCACT 297948
Query 248 ATCAATCTGTC 258
||||||||||
Sbjct 297947 GTCAATCTGTC 297937
>seq62145
Length=2029744
Score = 73.4 bits (80), Expect = 6e-11
Identities = 59/69 (86%), Gaps = 2/69 (3%)
Strand=Plus/Minus
Query 47 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106
||||||||||||||||||||||||| ||||| | || |||||| | |||| | |||||
Sbjct 1523884 TAAGGGCATCACAGACCTGTTATTG-CTCAATC-TCGGGTGGCTGAACGCCACTTGTCCC 1523827
Query 107 TCTAAGAAG 115
|||||||||
Sbjct 1523826 TCTAAGAAG 1523818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796203166920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |