Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20]
77,320 sequences; 2,650,836,958 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq18094 286 6e-75
seq40920 255 1e-65
seq58749 206 5e-51
seq55204 196 8e-48
seq73900 179 6e-43
seq42264 178 2e-42
seq10140 178 2e-42
seq63916 152 9e-35
seq3292 138 2e-30
seq62883 132 8e-29
seq69836 129 1e-27
seq39204 120 5e-25
seq76631 113 8e-23
seq51976 93.3 7e-17
seq2351 80.6 5e-13
>seq18094
Length=1937
Score = 286 bits (316), Expect = 6e-75
Identities = 201/228 (88%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 1637 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 1696
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
|||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| |
Sbjct 1697 ATGACGGTCTAAACCCAGCTCATGTTCCCTAATAGTGGATGAACAATCCAACGCTTGGTG 1756
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| ||||||||||||||| ||||||||||||||||||| || | ||||
Sbjct 1757 AATTCTGCTTCACAATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGTGACATTGCTA 1816
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1817 TGAACGCTTGGCCACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 1864
>seq40920
Length=1186382
Score = 255 bits (282), Expect = 1e-65
Identities = 213/261 (82%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||||||||||||||||| |||||||| || ||||| |||||||||||||||| ||
Sbjct 1146074 CATCAGTAGGGTAAAACTAATCTGTCTCACCACAGTCTAGTCCCAGCTCACGTTCCCAAT 1146015
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||
Sbjct 1146014 TAGTGGGTGAACACCCCAACGCTTGGGGAATTCTGCTTCAAAATGATAGAAAGAGCCGAC 1145955
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||| |||||||||||||||| ||| |||| ||| |||| |||||||||| |||||||
Sbjct 1145954 ATCAAAGGATCAAAAAGCAATGTCACTATAAACATTTGGTCACCACAAGCCAATTATCCC 1145895
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||| ||| || || | ||| | | || | |||||||| |||
Sbjct 1145894 TGTGGTAACTTTTCTGACACTTCCTGCTTAAAACCCCAAAGGTCAGAAGGATCGTGAGGA 1145835
Query 272 CACACTTTCATGGTTTGTATT 292
| |||||| ||| ||||||
Sbjct 1145834 TCCGCTTTCACGGTCTGTATT 1145814
>seq58749
Length=2680103
Score = 206 bits (228), Expect = 5e-51
Identities = 178/220 (81%), Gaps = 3/220 (1%)
Strand=Plus/Minus
Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135
||||||| ||||||||||||||||||||||| |||| ||| |||||| ||||| ||
Sbjct 1468462 AGCTCACATTCCCTATTAGTGGGTGAACAATTCAACACTTGGTGAATTCGGCTTCACAAT 1468403
Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA---CGTCGCTATGAACGCTTGGCT 192
|||||||||||| ||||| |||||||||||| |||| ||||||| ||||| |||||||
Sbjct 1468402 GATAGGAAGAGCTGACATTGAAGGATCAAAACGCAACGTCGTCGCTGTGAACACTTGGCT 1468343
Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252
||||||||||||||||||||||||||||||||||| ||| || || | ||| | | |
Sbjct 1468342 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACTTCCTGCTTAAAACCCCAAAG 1468283
Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| |||||| | ||||| | |||||| || || |||
Sbjct 1468282 ATCAGAAGGATTGTGAGGCCCCCCTTTCACAGTCTGCATT 1468243
>seq55204
Length=3538205
Score = 196 bits (216), Expect = 8e-48
Identities = 206/266 (77%), Gaps = 9/266 (3%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||| ||||||||| ||||||||||||||| ||||| || ||||||||| || |||
Sbjct 1191765 TCAACAGTAGGGTGAAACTAACCTGTCTCTCCACGGTGAAATTCCAGCTCACATTGTCTA 1191824
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||| ||||||||||| || || ||| | |||||| |||||| |||||||| |
Sbjct 1191825 TTAG--GGTGAACAATCTGACCGTT---GAACTGTGCTTCACGATGATAAGAAGAGCCAA 1191879
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||| || |||| | |||||||||| ||||||||||||||| ||||||| |
Sbjct 1191880 CATCGAAGGATGGAAGAGCAGCATCGCTATGAATACTTGGCTGCCACAAGTCAGTTATAC 1191939
Query 211 CTGTGGTAACTTTTCTGGCACCT-CTAGCCTCAAATTTCGAG-GGACTAAAGGATCGATA 268
|| |||||||| ||||| || || ||| || ||| | | || || | |||||| |
Sbjct 1191940 CTCTGGTAACTCTTCTGACATCTCCTA--CTTAAAATGCAAGAGGTCAGCAGGATCACGA 1191997
Query 269 GGCCACACTTTCATGGTTTGTATTCA 294
||| ||||||||||| ||||||||
Sbjct 1191998 GGCTCCACTTTCATGGCCTGTATTCA 1192023
>seq73900
Length=2318952
Score = 179 bits (198), Expect = 6e-43
Identities = 162/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||| ||||| |||||| | |||| |||||| | |||||| |||| |||||||||| |
Sbjct 877476 TCATTAGTAGAGTAAAATTTACCTATCTCATAGCAGTCTAAGCCCAACTCACGTTCCATG 877535
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
| |||| |||||||||||||| ||| |||| |||| || ||||||| ||||| ||
Sbjct 877536 TAAGTGAGTGAACAATCCAACACTTGATGAATCCTGCCTCTCAGTGATAGGGAGAGCTGA 877595
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|| |||| |||||||||| |||| || |||| |||| || | ||||||||||||||
Sbjct 877596 CAAAGAAGAATCAAAAAGCGACGTTACTGTGAATGCTTAGCCACTGCAAGCCAGTTATCC 877655
Query 211 CTGTGGTAACTTTTCTGGCACCTC 234
||||| ||||||||||| ||| ||
Sbjct 877656 CTGTGTTAACTTTTCTGACACTTC 877679
>seq42264
Length=2517936
Score = 178 bits (196), Expect = 2e-42
Identities = 140/168 (83%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||| |||||| ||||||||||||||||| || ||||| |||||||||| ||||| ||
Sbjct 271675 TCATCGGTAGGGGAAAACTAACCTGTCTCACGATGGTCTCAACCCAGCTCGCGTTCTCTG 271734
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||| |||||| ||| |||| ||| |||||| | |||||||| ||||||||
Sbjct 271735 TTAGTGGGCGAACAACCCAGTGCTTGGTGAACTCTGCTCCACAATGATAGGGAGAGCCGA 271794
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198
|||| ||||| |||| |||||| ||||| ||||| |||||| ||||||
Sbjct 271795 CATCAAAGGAGCAAAGAGCAACATCGCTGTGAACACTTGGCCGCCACA 271842
>seq10140
Length=1796236
Score = 178 bits (196), Expect = 2e-42
Identities = 145/176 (82%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| ||||||| |||||||||||| |||||||||||||| || |||||
Sbjct 623516 GAATTCTGCTTCACAATGATAGAAAGAGCCGACATTGAAGGATCAAAAAGTGACTTCGCT 623575
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
|||||| |||||| ||||| |||||||||||||||||||||||||||| |||||| ||
Sbjct 623576 ATGAACACTTGGCCACCACAGGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGC 623635
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| ||| | | || | ||||||| ||||| | |||||||||| ||||||||
Sbjct 623636 TTAAAACCCCAAAGGTCAGAAGGATCAGGAGGCCCCGCTTTCATGGTCTGTATTCA 623691
>seq63916
Length=1694157
Score = 152 bits (168), Expect = 9e-35
Identities = 116/136 (85%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||
Sbjct 1675676 TCATCAGTAGGGTAAAACTAACCTGTCTCAGGGTGGTCTAAGCCCAGCCCACGTTCCCTG 1675735
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||| | |||| ||||||||| ||| |||||||||||| |||||| ||||||||||
Sbjct 1675736 TTAGGGTGTGAGCAATCCAACACTTGGTGAATTCTGCTTCACAATGATA-GAAGAGCCGA 1675794
Query 151 CATCGAAGGATCAAAA 166
|| ||||| ||||||
Sbjct 1675795 CACTGAAGGGTCAAAA 1675810
>seq3292
Length=7324000
Score = 138 bits (152), Expect = 2e-30
Identities = 100/116 (86%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| || |||||||| || |||||| ||||||||||||||||| | |||
Sbjct 800690 GAATTCTGCTTCACAATTATAGGAAGGGCTGACATCCAAGGATCAAAAAGCAACATAGCT 800749
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||| |||||| |||||| |||| |||||||||||||| ||||||| ||||||
Sbjct 800750 ATGAACACTTGGCCACCACAATCCAGATATCCCTGTGGTAAATTTTCTGACACCTC 800805
>seq62883
Length=78040
Score = 132 bits (146), Expect = 8e-29
Identities = 99/116 (85%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
||||| || ||| |||||||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct 56175 GAATTTTGTTTCACAATGATAGGAAGAGCTGACATTGAAGGATCAAAAAGCAATGTCACT 56234
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
||||| |||||||||||||||||| ||||||||| ||||| |||| | ||||||
Sbjct 56235 GTGAACACTTGGCTGCCACAAGCCAATTATCCCTGCGGTAAATTTTTGGACACCTC 56290
>seq69836
Length=190059
Score = 129 bits (142), Expect = 1e-27
Identities = 106/129 (82%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
|||||||| |||||||| ||||||||||||| || | |||||||| ||||| |||||||
Sbjct 151963 TAGGAAGAACCGACATCAAAGGATCAAAAAGTGACATTGCTATGAATGCTTGCCTGCCAC 151904
Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257
||||||||||| |||||||||||||||||| ||||| || | ||| || | || |
Sbjct 151903 AAGCCAGTTATTCCTGTGGTAACTTTTCTGATACCTCCTGCTTAAAACCTCAAAGGTCAG 151844
Query 258 AAGGATCGA 266
|||||| ||
Sbjct 151843 AAGGATAGA 151835
>seq39204
Length=1831341
Score = 120 bits (132), Expect = 5e-25
Identities = 115/145 (79%), Gaps = 8/145 (6%)
Strand=Plus/Plus
Query 2 ACTAAGCGGAATTACCATTGGGGCGACGG----TCATCAGTAGGGTAAAACTAACCTGTC 57
||||||||| ||||| || ||| || | ||||| |||||||||||||||||||||
Sbjct 1005187 ACTAAGCGGGATTACTAT---GGCAACAGCACATCATCGGTAGGGTAAAACTAACCTGTC 1005243
Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117
||| ||||||| |||||||||||||||||| |||||||||||||| | || ||||
Sbjct 1005244 TCACAGCGGTCTAGACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAGACAAATGCTTGG 1005303
Query 118 CGAATTCTGCTTCGGTATGATAGGA 142
|| |||| || ||| ||| ||||
Sbjct 1005304 TGAGTTCTTCTCTGGT-TGAGAGGA 1005327
>seq76631
Length=1025911
Score = 113 bits (124), Expect = 8e-23
Identities = 123/161 (76%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193
||||||||||||| ||||| |||| ||||||| | | || |||||| |||||||
Sbjct 106932 ATGATAGGAAGAGTTGACATTGAAGAATCAAAACGTGATCTCCTTATGAATGCTTGGCCA 106991
Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC-GAGG 252
|||||| |||||| ||||||| |||| ||||||| ||||| | |||||| | | || |
Sbjct 106992 CCACAAACCAGTTGTCCCTGTAGTAAGTTTTCTGAGACCTCCTG-CTCAAAATCCTGAAG 107050
Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| | ||| ||| ||||| |||||||||| |||||||
Sbjct 107051 GTCAGAAGAATCATGAGGCCCTGCTTTCATGGTCTGTATTC 107091
>seq51976
Length=564124
Score = 93.3 bits (102), Expect = 7e-17
Identities = 77/93 (83%), Gaps = 2/93 (2%)
Strand=Plus/Plus
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
|| ||| |||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||
Sbjct 188843 AACAGCTAACATTGAAGGATTAAAAAGCAATGTCACTATGAAAACTTGGCTGCCACCAGT 188902
Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|| ||| ||||||||||| |||||| ||||||
Sbjct 188903 CAATTACCCCTGTGGTAA--TTTCTGACACCTC 188933
>seq2351
Length=893335
Score = 80.6 bits (88), Expect = 5e-13
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||| |||| ||||||||||||| |||||||||||| |||||||||||||| |
Sbjct 171938 ATTAGTATGTGAGCAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTG 171879
Query 150 ACATCGAAGGATCAAAA 166
|||| |||||| || ||
Sbjct 171878 ACATTGAAGGACCAGAA 171862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853739377920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |