Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= AAMG01001157.1 Length=391 Score E Sequences producing significant alignments: (Bits) Value seq16390 650 0.0 >seq16390 Length=59487 Score = 650 bits (720), Expect = 0.0 Identities = 380/392 (97%), Gaps = 1/392 (0%) Strand=Plus/Minus Query 1 CGATGAACGCTCGGGTTTGCGCTTGCTCGT-ACGTAAGTGGTTCGTGACTTGACGGCAGC 59 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5876 CGATGAACGCTCGGGTTTGCGCTTGCTCGTTACGTAAGTGGTTCGTGACTTGACGGCAGC 5817 Query 60 TGTACGTCAATCGTTTCAGGTGCTGTTCGGCCTCATTGGAGGAGTTGGCCGCTTTGGCGT 119 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5816 TGTACGTCAATTGTTTCAGGTGCTGTTCGGCCTCATTGGAGGAGTTGGCCGCTTTGGCGT 5757 Query 120 CACGGTATACCTCGCAGTGCTGCTCAATGGCTATGAGGGATTCTTTCAGGTCAGGAGCAG 179 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5756 CACGGTATGCCTCGCAGTGCTGCTCAATGGCTATGAGGGATTCTTTCAGGTCAGGAGCAG 5697 Query 180 CACGACCAAAGCCCTGAAGAGAAATTTGCGCGCCGACGTCCAGCAGCAAGCCACTGAGGT 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 5696 CACGACCAAAGCCCTGAAGCGAAATTTGCGCGCCGACGTCCAGCAGCAAGCCACTGAGGT 5637 Query 240 AGTAGAGCTCATCATCTTCTTCAATGAGCCCTTTGGACATCAAAAAGGAAATCCCCTTTG 299 |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct 5636 AGTAGAGCTCATCATCTTCTTCGATGAGCCCTTTGGACATCAGATAGGAAATCCCCTTTG 5577 Query 300 TCCGTCGCTCCGGCAGCGCCACACCGTCCTCGTCTGCCATCGCCAATGCTTCAAGAAAAG 359 |||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct 5576 TCCGTCGCTCAGGCAGCGCCACTCCGTCCTCGTCTGCCATCGCTAATGCTTCGAGAAAAG 5517 Query 360 GTGCATTTCGTGTGAGTGCATCGCCCAGCTCG 391 |||||||||||||||||||||| ||||||||| Sbjct 5516 GTGCATTTCGTGTGAGTGCATCACCCAGCTCG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147911747840