Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ammotragus_20lervia_20[genbank_20GCA_5F002201775.1_202017-06-20] 77,320 sequences; 2,650,836,958 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq69891 86.0 4e-15 seq45446 73.4 2e-11 >seq69891 Length=1360345 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| | ||||||||| ||||||||||||||||||| Sbjct 1052574 CTCACTAAACCATC-CAATCGGTAGTA-GTGACGGGCGGTGTGTACAAAGGGCAGGGACT 1052517 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1052516 TAAT-CAACGCAAGCT 1052502 >seq45446 Length=1454406 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/77 (83%), Gaps = 7/77 (9%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||| ||||| ||||| || ||||||||| ||||||||||| ||||||||| ||||||||| Sbjct 805257 TCTTACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAAGGCAGGGAC 805200 Query 108 GTAATACAACGCAAGCT 124 | |||||||||| Sbjct 805199 TT-----AACGCAAGCT 805188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300581957600